K06401

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K06401

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • present in fewer numbers in organism (PATO:0001997)
    (Rosette leaf::Number::few)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Original: K06401

Determination of introduced cDNA(s)

  • J023084G21 - Rice Full-length cDNAs - Original: J023084G21

    full reading [+] show sequence

    Nucleotide sequence: J023084G21 - full reading 
    CCATGGGGCC CCACCTCGTC AGTGACCTAC TCTCCATTAA TTACGCTAAC 
    TCCTCACGTC GTCTCGCCCG CAAAATGCTT CTCTTCCTCC TCTTCCTCCT 
    CGCCGCCGGC GAGGCCGCGG CGGCGGCGGC GGCCACCACG CTCACCGCGA 
    CGCCGGCGAA GCTCACCCAG TCCGACCGCG AGATCACGAT CCGGTGGTCG 
    GGCCTCCCGG ACCCGGACGG CCTCGACTAC GTCGGCATCT ACTCGCCGCC 
    GACCTCCTCC GACCGCGACT TCCTCGGCTA CCTCTTCCTC AACGGCTCGG 
    CCACCTGGCG CACGGGCACC GGCGAGCTCA CCCTCCCGCG CCTCCCCAAC 
    CTGCGCGCGC CCTACCAGTT CCGCCTCTTC CGCTGGCCCG CGAGGGAGTA 
    CTCCTACCAC CACATCGACC ACGACGGGAA CCCGCTCCCC CACGGCCGCC 
    ACCGCGTCGC CGCCTCCGGT GAGGTCGCCT TCGACTCCCC CTCCCGCCCC 
    GACCAGGTGC ACCTCTCGTT CGCCGACGGG GTCGACGAGA TGCGGGTCAT 
    GTTCGTCTGC GGCGACGGCG GGAGGAGGGT GGTGAGGTAC GGGCCGGCGA 
    AGGAGGAGGG GGAGGGCTGG AAGGAGGTGG CCGCGGAGGT GAGGACGTAC 
    GAGCAGAAGC ACATGTGCGA CTCGCCGGCG AACTCCTCCG TCGGGTGGAG 
    GGATCCAGGG TTCGTCTTCG ATGGACTCAT GAAGGGATTG GAGCCCGGGA 
    GGAGGTACTT CTACAAGGTT GGTAGCAACT CTTCAGGATG GAGCGATACG 
    TACAGCTTCA TTTCACGTGA CAACGAAGCC AATGAAACTA TTGCATTTCT 
    CTTTGGTGAC ATGGGCACTT ATATACCATA TAACACCTAT GTCCGCACGC 
    AAGATGAAAG CTTGTCGACT GTAAAGTGGA TACTTCGTGA TATTCAAGCC 
    CTTGGAGATA AGCCTGCATT TATTTCACAC ATTGGGGACA TCAGCTATGC 
    TAGAGGTTAT GCTTGGGTAT GGGATCACTT CTTCAACCAG ATTGAGCCTA 
    TTGCTGCCAA TACCCCATAC CATGTCTGCA TAGGAAATCA TGAATATGAT 
    TGGCCATTGC AACCTTGGAA ACCTTGGTGG GCAACTGGTA TATATGGAAC 
    AGATGGTGGA GGTGAATGTG GCATACCTTA CAGCGTAAAG TTCAGAATGC 
    CTGGCAATTC TTTTGTGCCT ACTGGCAATG GAGCTCCCGA CACCCGAAAT 
    CTTTACTACT CCTTCGATTC AGGGGTTGTG CATTTTGTTT ACATGTCAAC 
    TGAGACTAAT TTTGTTCAGG GCAGTGACCA ATACAACTTC ATAAAAGCTG 
    ACCTAGAGAA GGTCAACCGA AGTAGAACTC CTTTCATTGT GTTTCAGGGC 
    CACCGGCCAA TGTATACATC AAGCAATGAA GCTAGGGATT TTGCTCATAG 
    ACAGCAGATG CTCCAGAACC TGGAACCACT CTTGGTAACA TACAAAGTGA 
    CCCTTGCACT GTGGGGACAT GTCCACAGGT ACGAGAGGTT CTGCCCCATG 
    AAAAACTTCC AATGTGTCAA CATGTCATCA AGCTTCGTAT ACCCTGGTGC 
    CCCTGTTCAT CTTGTGATCG GGATGGGTGG TCAAGATTAT CAACCATTCT 
    GGCAGCCAAG GAAGGATCAC CCTGATGTAC CTGTCTATCC GCAGCCTGAG 
    AGGTCTATGT ACCGTGGTGG GGAGTTTGGA TACACAAAAC TTGTAGCTAC 
    AAAGGAGAAG TTGACACTAA CGTACATCGG CAACCATGAT GGGCAAGTCC 
    ATGATATGGT GGAGATATTC TCTGGGCAAG TATCTAATAA CAATGGTGTT 
    CCTGAGGTGA TCGATGATAC AAAGCTCAGC ACAGGGGTCA GCACCAAACT 
    GAAAATCCCT CTGTTCTCCT TGGAAATTGT AGGCAGCGTG ATGTTTGCAC 
    TGGTTCTGGG TTTCTCTCTT GGATTTCTGA TCAGAAGGAA GAAAGAAGCT 
    GCACAGTGGA CCCCAGTGAA GAACGAGGAG ACCTAAAATC ACACACTGTA 
    TCTAATGCAA ATGCAAATGG TTTTTGATCA ACAACCTGTT TATAGGATCG 
    TGCCCCATTT CTTGGGGCTC TACAGTGTTG TACTATAGTG CATAGAGTAT 
    TGTAACATGT GCTGTGTCAA TCGTGGGCAT TGTAGAGTTT GATCAGCATA 
    TCTGTTGCCG TGATTCTACG ATACATAAAG GTTTCAATAA GTGACATTAC 
    GTTCACATCA ATTGGTTGGT ATGAGTGGTT AACC

    Gene models with high sequence identity

    1. AT1G13900.1 [+] show detail - Purple acid phosphatases superfamily protein
      E-value: 0; Score: 768.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Metallophosphoesterase 3.3e-17
    HMMPanther ACID PHOSPHATASE RELATED 7.6e-85
    Gene3D Purple acid phosphatase, N-terminal 0.00014
    Gene3D no description 8e-73
    superfamily Metallo-dependent phosphatases 4.3e-58
    superfamily Purple acid phosphatase-like, N-terminal 5.7e-21

    See the detailed result >

    AT1G13900.1

    Model type
    Protein coding
    Short Description
    Purple acid phosphatases superfamily protein
    Computational Description
    Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 9 (TAIR:AT2G03450.1); Has 1738 Blast hits to 1720 proteins in 355 species: Archae - 1; Bacteria - 507; Metazoa - 197; Fungi - 77; Plants - 727; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR