K06623

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K06623

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K06623

Determination of introduced cDNA(s)

J013116O19 - Rice Full-length cDNAs - Original: J013116O19

full reading [+] show sequence

GCTCCAGCAA GCAGCTAGCT ATAGCTAAGC TCTGAGCGAT CCATGGCCAT 
GAAGTGCCTC TTCCTCTTCT TCGCCTTCCT CGTCGCCTTC TTCCCCGGCG 
CCGCCGTCGG CGCCGGGCTG AAGGTCGGGT TCTACAACAA GACGTGCCCG 
TCGGCGGAGC GCCTGGTGCA GCAGGCGGTG GCCGCCGCGT TCAAGAACAA 
CAGCGGCGTC GCCCCCGGCC TCATCCGCCT GCACTTCCAT GACTGCTTTG 
TCAGAGGCTG CGACGCCTCG GTTTTGATCG ACGGGAACGA CACCGAGAAG 
ACCGCGCCAC CAAGCAACCC CAGCCTCCGC GGATTCGAGG TGATCGACGC 
CGCCAAGGCC GCCGTCGAGG CGGCGTGCCC GCGTGTCGTC TCCTGCGCCG 
ACATCCTCGC CTTCGCCGCC CGCGACAGCG TCGCCCTCAC CGGCAACGTC 
ACTTACAAGG TCCCCGCCGG CCGCCGCGAC GGCAACGTCT CCATCGCCCA 
GGACGCGCTC GACAACCTGC CCCCTCCCAC CTTCAACGCC ACGGAGCTCG 
TCGGCCGCTT CGCCAACAAG TCGCTCACCG CGGAGGACAT GGTGGTGCTC 
TCCGGCGCCC ACACCATCGG CGTCTCCCAC TGCGACTCCT TCACCAGCCG 
CCTCTACAAC TTCACCGGCG TCGGCGACGC CGACCCGGCG ATCAGCGCCG 
CCTACGCGTT CCTCCTCCGC GCCGTGTGCC CCTCCAACAG CAGCCAGTTC 
TTCCCCAACA CCACGGTGGA CATGGACGTG ATCACCCCGG CGGCGCTCGA 
CAACAAGTAC TACGTCGGGG TCGCCAACAA CCTGGGCCTC TTCACGTCGG 
ACCACGCGCT GCTCACCAAC GCCACGCTCA GGGCGTCGGT GGACGAGTTC 
GTCAAGAGCG AGACGCGGTG GAAGAGCAAG TTCGTGAAGG CCATGGTGAA 
GATGGGCGGC ATCGAGGTGA AGACCGGGAC GACGCAGGGC GAGGTCAGGC 
TCAACTGCAG GGTCGTCAAC AAGAGGAGCG CCAACGCTGA GCTCGAGCTC 
GAGCTCGCCG CCGCCATGGA TGATGGGGAT GAAGTGGCAG CGAGCTAATT 
AATTAAGGTG GTAGTAGCTG ATCTGATGTC GCGTGTTCTT CAGAGGTTTC 
AGCAATAAGT TTGTGATCGG TGTTGTTACT TGTTAGATGT ATGCTGCTGC 
TGTTTTTAAC GAGAATAAGA GTTGCTGGAG AAGAAGTTTT TTTCTTCTTG 
TTGTTTTTTA ATTTGTTTTC TGTTTTGGCT TGTGTTTGGG TGAGTGCTTT 
GGTGTGAACC TGTCATGAAA TCAAGGAAGA AATTTGGCGA AATGTTGCCG

Gene models with high sequence identity

AT4G11290.1 [+] show detail - Peroxidase superfamily protein
E-value: 8e-70; Score: 261.00

InterPro Scan Digest

Program	Description	E-value
FPrintScan	Plant peroxidase	9.1e-54
FPrintScan	Plant peroxidase	9.1e-54
FPrintScan	Plant peroxidase	9.1e-54
FPrintScan	Plant peroxidase	9.1e-54
FPrintScan	Plant peroxidase	9.1e-54
FPrintScan	Plant peroxidase	9.1e-54
FPrintScan	Plant peroxidase	9.1e-54
FPrintScan	Plant peroxidase	9.1e-54
FPrintScan	Plant peroxidase	9.1e-54
FPrintScan	Haem peroxidase, plant/fungal/bacterial	1e-28
FPrintScan	Haem peroxidase, plant/fungal/bacterial	1e-28
FPrintScan	Haem peroxidase, plant/fungal/bacterial	1e-28
FPrintScan	Haem peroxidase, plant/fungal/bacterial	1e-28
FPrintScan	Haem peroxidase, plant/fungal/bacterial	1e-28
Gene3D	no description	2.6e-59
PatternScan	Peroxidases heam-ligand binding site	0
PatternScan	Peroxidase, active site	0
Coil	coiled-coil	0
ProfileScan	Haem peroxidase, plant/fungal/bacterial	73.996
superfamily	Haem peroxidase	2.1e-107
HMMPfam	Haem peroxidase, plant/fungal/bacterial	7.5e-78

See the detailed result >

AT4G11290.1

Model type: Protein coding
Short Description: Peroxidase superfamily protein
Computational Description: Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR