K06816

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K06816

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • present in fewer numbers in organism (PATO:0001997)
    (Rosette leaf::Number::few)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)
  • abnormal (PATO:0000460)
    (Stem::Shape::zigzag)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K06816

Determination of introduced cDNA(s)

  • J023095D21 - Rice Full-length cDNAs - Original: J023095D21

    full reading [+] show sequence

    Nucleotide sequence: J023095D21 - full reading 
    GGTCCCCGCC GTCCCCGCCG TCCACGCCGG CGCCGCGCTG AGCCGCCGAC 
    GTCGGAGCGA CTGCGACTCC TCCTGTCGCC GCCCGCCTTC TCCAGTTCTC 
    CCCTCTGCCC GTCTCCGTTT GGCCGCCGCC CGCCTTCTCC TGCTCTTGGC 
    TGCTCCACGC CTCCACCGAT CCGGCGCTCC ACCCTTCAGC CCAGAGGATT 
    GGTAAATTGT TACTGATTAG TGATATTGCG TCGTTATTTC AGAACCATGC 
    GGCCGCTTGT GGATGCTGAC TACCCAAGGA AAAATTCCTA GCTACGCCAC 
    TACCCACCAT CGCGGCCGCT GCTTTCCCCT CCCTGCCCCA AATGCTCCCG 
    GCCACCTCCA CCGTCCCACC CACCTCGCCC CTTCCCCACT CCCGCGCTGC 
    CCCGCGCCGC CACCTCCGCG CAGGGCTTCT CCACGGGTCC GTGGCGACGG 
    CGGCGGTGGT TCGGGCGTGC GGGGTGACGA CGGGCCACCG TCGGAGGATG 
    GGCTCGGTTC GGGCGAGCCC CAGGGCAGGC GGATGGGAGG TGGCGATGGT 
    GGATAAGGAG GGGGTAGGGG TGGAGCGGCT AGTGGAGGTG GCGCAGAGGG 
    CGGCAGACGC CGCAGGGGAG GTGCTCAGGA AGTACTTCCG GCAACGCGTC 
    GAGATCATCG ACAAGGAGGA TCAGAGTCCT GTAACTATTG CAGATAGAGA 
    AGCGGAAGAA GCAATGGTGT CAGTCATTCT GAAGAGCTTC CCTTCCCATG 
    CCGTTTTTGG TGAGGAAAAT GGTTGGAGAT GCGTGGAAAA GTCTGCTGAT 
    TATGTTTGGG TTTTGGACCC CATAGATGGA ACAAAAAGCT TCATAACTGG 
    CAAGCCTCTG TTTGGTACGC TTATTTCACT CTTGTACAAG GGGAAGCCGG 
    TTATTGGCAT CATTGATCAG CCAATCTTGA GAGAAAGATG GGTTGGGGTT 
    GATGGGATGA AAACAACCTT AAATGGACAA GAAATATCTG TTCGCCCTTG 
    CAATGTCCTG GCACAAGCTT ACTTATATAC AACAAGTCCA CATTTGTTTG 
    CAGGAGAAGC TGAAGATGCA TTTATTCGTG TACGGGATAA GGTCAAAGTC 
    CCACTGTATG GTTGCGATTG CTATGCCTAT GCTCTTCTTG CCTCTGGTTT 
    TGTAGATCTT GTTGTTGAAT CAGGATTGAA GCCATATGAT TTTCTCTCAT 
    TGGTACCAGT CATTGAAGGA GCTGGAGGTT CAATAACAGA TTGGAAAGGA 
    AACAAGCTCC ATTGGCCTGT CTCTGCGGAA TCACGGCCTG AAAGTTTCAA 
    TGTGGTGGCA TCTGGAGACG CCCGTGTCCA CAAGCAGGCC CTTGATGCGT 
    TGCAATGGCA CTAGTCTGCA AAACACATCC AAGTTTGGTC TCTAAACAAA 
    CATGAATGTG TTATTCATGT GTCCAATAAA CAGTGTATTT TGTATGCTTG 
    CGCCGTGAGC GACTAGTTAT TCAAATTGCA CTGCCACTAA TAAAATCAAT 
    TTGATGGTT

    Gene models with high sequence identity

    1. AT4G39120.1 [+] show detail - myo-inositol monophosphatase like 2
      E-value: 6e-114; Score: 408.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 7.4e-39
    Gene3D no description 1e-11
    HMMTigr Histidinol-phosphate phosphatase, putative, inositol monophosphatase 4.2e-129
    HMMPanther MYO INOSITOL MONOPHOSPHATASE 6.6e-43
    HMMPanther Inositol monophosphatase 6.6e-43
    PatternScan Inositol monophosphatase, metal-binding site 0
    HMMPfam Inositol monophosphatase 2.3e-50
    superfamily Carbohydrate phosphatase 3.4e-70
    FPrintScan Inositol monophosphatase 4.3e-19
    FPrintScan Inositol monophosphatase 4.3e-19
    FPrintScan Inositol monophosphatase 4.3e-19
    FPrintScan Inositol monophosphatase 4.3e-19
    FPrintScan Inositol monophosphatase 4.3e-19

    See the detailed result >

    AT4G39120.1

    Model type
    Protein coding
    Short Description
    myo-inositol monophosphatase like 2
    Curator Summary
    Encodes a chloroplast-localized member of the myo-inositol monophosphatase family, IMPL2 (myo-Inositol monophosphatase like 2) that seems to have multiple enzymatic activities. It contributes to histidine biosynthesis based on it histidinol-phosphate phosphatase activity. In addition, the protein can act as an inositol monophosphatase and an L-galactose-1-phosphate phosphatase in vitro.
    Computational Description
    myo-inositol monophosphatase like 2 (IMPL2); FUNCTIONS IN: histidinol-phosphatase activity, 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidinol-phosphate phosphatase, putative, inositol monophosphatase (InterPro:IPR011809), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.1); Has 15134 Blast hits to 15130 proteins in 2267 species: Archae - 157; Bacteria - 8374; Metazoa - 557; Fungi - 304; Plants - 238; Viruses - 0; Other Eukaryotes - 5504 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR