K06923

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K06923

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K06923

Determination of introduced cDNA(s)

J023076M04 - Rice Full-length cDNAs - Original: J023076M04

full reading [+] show sequence

GGTCCCCTTC CCTTCGCGTA AAAGAAAATC TACAGTCTCT CGTCGTCTCC 
TCCCGCCCTC CGCCCCCTTG CGCGGCTGAA CAGGGGCGGG GCGCCGATCT 
CCATCTGGCG AGCAGAGCAG GGAAGGCGAG GGGATCCTGG ATATTTTAGG 
ATCATCATAA ACTTCATTGC TTTTGCTGTA TGTTATTCCA ACAGGGTGCT 
CTTTGCTATC TTATACTTCT TCAGCTTTTT CTGCGATGGA TTGGATGGTT 
GGTTTGCATG AAAGTTTAAC CAAGCATCAA CATTTGGAGC TGTGCTGGAC 
ATGGTAACAG ATAGGGTTAG CACTGCCTGT TTATTGGCAC TTCTCTCCCA 
ACTTTACAGA CCTGGCTTAG TTTTTTTGAT GCTGCTTGGG TTGGATATTA 
CAAGCCATTG GTTTCAAATG TATAGTATGT TCCTATCAGG TAAAACTAGC 
CACAAGGATG TGAAGGACAC TGGCAATTGG CTTCTAAAAT TATATTATGG 
ACATCGACCA TTCATGGCAT TCTGTTGTGT TGCTTCCGAG GTTCTGTACA 
TAATTCTTTT TCTGTTTGCT GATGAGAAAT CGACAAGCTT GCTTAATGTG 
TGCAGATGCT TTCTAAAGGG AAGTCCTCTC ACTTTCTTCG TTTTTATTTC 
AACTCTAGTT GGTTGGGCAT TAAAACAAGT GATCAATATC ATCCAGGTAT 
CCAGAAACCA ACATTAAAAT TTCTTGCAGT TGCAGGTGCT TGATATTTGT 
ACATCTGCAA GTATTTAAGT TCTAATTATG ACACTAATAA TAGGTTTGTT 
ATAAAGCTGA AGAAAAAGTG TTGATGCACT GGTTAGCTCA TATGCTTTAC 
ATTAGGGTTT AGCTAGCCCT GGTTAATAGG AGATACATTA TGCCCAAATT 
ATAGGTTCAC ATATGTTGCT AAAAGCCTAG AGCAGGTGCT TATTGTAACA 
TTCTATTCTT TATTTAGAGT GTCTATTTAT ATGATTCTAG CAGTACTAAT 
AGCGACACAT TAATAAGAAG TGTGGATCGA GATGTCGACT ACCACTAGAG 
TTGGGCACTT GTAGGATCGA GATGTCGACT AGAGGGGAGG GGGGGGGGAG 
GGGTGAATAG GCAATTTAAA ACTAAATGAC ACCTAATATA AAACTAAGGG 
TGTGTTTGGT TCCCGGTCAA GGTTGGATGG GATATGGCGG TCCAGTTTTT 
TGTTTGGTGG AGTGAATATG GCGATCCAGT TTTTTGTTTG GTTGTAGGGA 
TGAAAGTTGA TATGGTGATC CATTTTTTTG TTTGGTTGGG GGAGTGGGAT 
GGATGAGTGG TTGCAATCAC CCTTTCATTA GAGGTGGTGA GTCTACCCCT 
CCAAATTCTC ACCCAAAAAT TATCAATCTA CTAAAAAAAA TCTAAATAGA 
AATAAAAAAG CAGAAAGAAA TAAAAGGGGA AGG

Gene models with high sequence identity

AT4G38570.1 [+] show detail - probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
E-value: 8e-68; Score: 254.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	PTHR15362	7.60000011115791e-54
HMMPfam	CDP-alcohol phosphatidyltransferase	9e-06
HMMPanther	PHOSPHATIDYLINOSITOL SYNTHASE	1.2e-08

See the detailed result >

AT4G38570.1

Model type: Protein coding
Short Description: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
Computational Description: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 (PIS2); FUNCTIONS IN: phosphotransferase activity, for other substituted phosphate groups; INVOLVED IN: phosphatidylinositol biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462), CDP-diacylglycerol-inositol 3-phosphatidyltransferase, eukaryote (InterPro:IPR014387); BEST Arabidopsis thaliana protein match is: phosphatidylinositol synthase 1 (TAIR:AT1G68000.1); Has 2530 Blast hits to 2530 proteins in 950 species: Archae - 14; Bacteria - 1497; Metazoa - 167; Fungi - 185; Plants - 77; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink).
Link: InterPro Scan - TAIR