K06931

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	low saturation (PATO:0000328) (Seed::Color::pale)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K06931

Determination of introduced cDNA(s)

J013055F13 - Rice Full-length cDNAs - Original: J013055F13

full reading [+] show sequence

GCTTCCTCGC CTTCCTCGAG TTGAGCTCTC GCTCCGCCGC CGGCCGCCGC 
CTCGAGCTGG GAGGCGGCCA TGGGCGCCGC CGGCCTCCCG GCACCGGGAT 
GCCTGCAGAA ATTTGGACAT ATCGTTGATG CCGAAAGATT TGTATTAAAC 
ATGTCCAACC GTGGAATCCA TAAGGCACTC AGTTTTCAGT GCTTTGCTTC 
TGATGGGCGT GGCTTTGGAG CTGGTTCTAC TAATAGACGG AAAATTAAAA 
GCAAGAAGAG GCAAAAGGAT GTTGCACAGG AACCAAGCAA GGTAATATCT 
GGAGGTTCCA AGAACAGGGA CCAATGGGCA CTGGACTTAG GGACTCGAAG 
GGAAAGTAAA TATGCTAAAA CTGTCATGGA TAAGCAATTT CTAGAAAAAG 
TGGAAGCTGT TCGAAGATCT GCACTTGAGA AAAAGAAAGC TGATGAGAAC 
AAAAATTATC AAGCTATTGA TTATGATGCC CCAATTGAAT CAGATAAGAG 
TACAATTGGT TTTGGTACGA GGGTTGGAAT TGGCATAGCT GTCATGGTCT 
TGCTCCTCCT CCTCTTTCCC CTTCCTCTCG CCGCCCCAAA TCACCCGCCC 
ACCAAAACCC TCGCCGCGGC CTCCGCCGCA GCGGGATTCC GGCCACCACC 
AGCAGCCGCC GCGGCCACCG GGGCGCCCTC CTCCTCCTGC CCCCCGGCAC 
CGGCGACCGA CCATCCCCTT GCCCCCTTTC CCCGTCGGGT TGTGAGGCGA 
GATGAGGGAG CTGCGCGTCG CCGTCCTCAT CATCGCGGTC TCGCTGCCGT 
CCTTCTCCGC GTCCGACCGC CAAGGAGATG CCTTATATGA TATGAAACAA 
AAACTGAATG TTACTGGCAA TCAGCTTTCG GATTGGAACC AAAATCAAGT 
CAACCCTTGT ACATGGAATT CTGTAATTTG TGACAATAAC AACAATGTTA 
TTCAAGTAAC ATTGGCTGCT CGTGGATTTG CTGGAGTTTT GTCACCAAGA 
ATTGGAGAAC TGAAATATTT GACTGTCCTG TCCTTGGCTG GTAATAGGAT 
TTCCGGTGGC ATACCAGAGC AATTTGGTAA TCTTTCTAGT TTGACAAGCT 
TAGATTTAGA AGACAACCTT TTGGTGGGAG AAATACCAGC TTCTCTTGGC 
CAGCTTTCTA AGCTCCAGTT GTTGATACTT AGTGATAATA ATTTCAATGG 
ATCAATTCCT GACAGTCTAG CAAAAATCTC AAGCTTGACT GACATCCGGC 
TGGCGTACAA TAATCTGTCT GGTCAGATAC CTGGTCCGTT ATTCCAAGTA 
GCACGTTACA ACTTTTCTGG TAATCACTTA AATTGTGGAA CCAACTTCCC 
CCACTCTTGC TCAACCAACA TGTCCTACCA GAGTGGATCC CATAGCTCAA 
AAATTGGCAT AGTACTTGGA ACAGTTGGAG GAGTAATAGG ACTTCTCATT 
GTAGCTGCTC TCTTTCTGTT CTGTAAAGGG AGGAGGAAAA GCCATCTGTG 
GGAAGTTTTT GTGGATGTAG CAGGTGAGGA TGATCGACGA ATTGCATTTG 
GCCAGCTCAA GAGATTTGCA TGGCGAGAAC TACAAATCGC GACGGATAAT 
TTCAGTGAAA GAAATGTTCT CGGGCAGGGA GGTTTTGGTA AAGTTTACAA 
AGGTGTTCTT CCAGATGGTA CTAAGATTGC TGTAAAACGA TTGACTGATT 
ATGAAAGTCC TGGTGGTGAG GCCGCCTTCT TGCGTGAGGT GGAGCTGATT 
AGTGTTGCAG TTCACCGCAA TCTTCTAAAA TTGATTGGCT TCTGCACAAC 
ACAAACAGAG CGCCTCCTGG TATATCCATT CATGCAGAAT TTGAGTGTTG 
CCTACCGATT GCGAGATTTT AAGCCTGGAG AACCTGTCTT AAACTGGCCA 
GAAAGAAAAC GGGTGGCCAT TGGTACAGCA CGTGGACTAG AATATCTGCA 
TGAACACTGC AACCCAAAGA TCATACACCG TGATGTCAAA GCGGCGAATG 
TCTTGCTTGA TGAGGACTTT GAACCTGTTG TTGGTGATTT TGGACTAGCG 
AAGCTAGTGG ATGTGCAGAA GACATCTGTC ACTACTCAAG TCCGTGGAAC 
AATGGGTCAC ATAGCACCTG AATATCTATC CACAGGGAAG TCATCAGAGA 
GAACTGATGT TTTTGGCTAC GGGATCATGC TTCTTGAGCT TGTGACTGGC 
CAGCGTGCCA TTGACTTCTC ACGCTTGGAG GAAGAGGACG ATGTTCTATT 
GCTCGATCAT GTAAAGAAGC TACAAAGAGA AGGGCAGCTA GGATCCATTG 
TGGACCGCAA CCTGAACCAG AATTATGACG ACGAGGAAGT TGAGATGATG 
ATACAGATAG CATTGCTGTG CACACAGTCA TCGCCCGAGG ATCGGCCATC 
CATGTCAGAG GCGGTTCGGA TGCTAGAAGG CGAGGGGCTG GCGGAGCGGT 
GGGAGGAGTG GCAGCAGGTG GAGGTGACAA GGAGGCAGGA GTACGAGCGG 
ATGCAGCGGC GGTTCGACTG GGGAGAGGAC TCTGTCTACA ACCAGGAAGC 
AATAGAGTTG TCTGGAGGTA GATGACAAGG GCCGTGACAA CAGACATCAA 
ACAAACGGCG TAAGCCGAAT CTGTACTTTT TCTGTAATGG ATGTAGCGTT 
GTTCTTTGTA GAGTAGATAG AATTGTCCTG GAACAACAGC GTAAGCGATA 
GCTGGTAAAT GATACAATCG GATGGATAAT GATATGATAG AAAAATAAAG 
TTGTATGTGT TTGGTTGGGC ATGGCTGAAC CTTAGCAGTT GTGTGCTCCC 
CATGCACTGT TATCAAATCG GCCGATTAGT CGTAAAGTCG GTCAAATTAG 
TTGACTAAGA GCCATGACTC TGACCAAATT AGTCGTAAAG TCGGTTGTAA 
ATTAGTCGTG ATTATTGTAG CAAATCACCA ATTCACCGTG CTAATTGGCT 
TATTGTGTTT AGTACTTT

Gene models with high sequence identity

AT5G10290.1 [+] show detail - leucine-rich repeat transmembrane protein kinase family protein
E-value: 0; Score: 796.00

InterPro Scan Digest

Program	Description	E-value
ProfileScan	Protein kinase, catalytic domain	34.93
HMMSmart	Serine/threonine-protein kinase domain	2.8e-28
HMMSmart	Tyrosine-protein kinase, catalytic domain	3.1e-27
HMMPfam	Serine/threonine-protein kinase-like domain	1.8e-41
HMMPfam	Leucine-rich repeat-containing N-terminal domain, type 2	1.6e-09
HMMPfam	Leucine-rich repeat	0.51
HMMPfam	Leucine-rich repeat	0.85
HMMPanther	PROTEIN SERINE/THREONINE KINASE-LIKE PROTEIN	1.4e-287
HMMPanther	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	1.4e-287
superfamily	Protein kinase-like domain	2.3e-77
superfamily	L domain-like	3.6e-36
Gene3D	no description	5.1e-37
Gene3D	no description	1.3e-23
Gene3D	no description	1.5e-46
PatternScan	Protein kinase, ATP binding site	0
PatternScan	Serine/threonine-protein kinase, active site	0
Coil	coiled-coil	0

See the detailed result >

AT5G10290.1

Model type: Protein coding
Short Description: leucine-rich repeat transmembrane protein kinase family protein
Computational Description: leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G65240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR