K07026

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07026

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07026

Determination of introduced cDNA(s)

  • J013155J02 - Rice Full-length cDNAs - Original: J013155J02

    full reading [+] show sequence

    Nucleotide sequence: J013155J02 - full reading 
    GTGGGCACAG CACATCATCA TCAGTAGCAC AGCACAAATA CAGGAGCGGC 
    CCGGCTATGG CAATGGCTTG TGCAGCACTA GTGCCGTTGC TACTGTTGCT 
    TCTTGTTGTG CTCTCTGGCT CTACATCTCT CGCTGACCAC AGTGCAGGTG 
    TAGATGAGGT CAACTACATC GTGGTGCTAA CCAGCAGCTG GCTCAAGCCA 
    AATTCCGTCT GCTCCAGCCT GATGAGCCCA CACCCCAACG TGACCAACTG 
    GGTCCCGTTG AGCCGACCGT ACGGGCCGTG CAGCTCCTCG CCGGCGAAGG 
    GTAGGGCGGC GCCGTCCACC GTCGACGGCA TGCTCTGGTC GGACCAGCAC 
    CGCGCCGACT ACATACAGTG GAGGCTCTCC GGCTCGGTCG CCGGCGTGCT 
    GCAGCCGGCC GACGACGTGC CGGTGTCAAC TAACTACGAA CAGCAGTCCA 
    TAGAAGGAGA TCTTAACTAT GGCACGTACT ACCCTGCACC TGCACCAATG 
    TCATCAAAGG CGATGAATCC GGCCGCCACC GGCGGCGGCG GCGGCGGGCC 
    GGGAGTGACC CAGACGATGG TGCTGGACAC GGCGAGCGAC GTGACATGGG 
    TGCAGTGCTC GCCGTGCCCC ACGCCGCCGT GCTACCCGCA AAAGGACGTC 
    CTCTACGACC CCACCAAGTC GTCGTCGTCC GGCGTCTTCT CCTGCAACTC 
    GCCGACGTGC ACCCAGCTCG GCCCCTACGC CAATGGCTGC ACCAACAATA 
    ACCAGTGCCA GTACCGCGTC CGGTACCCCG ACGGCACGTC GACGGCGGGC 
    ACCTACATCT CCGACCTGCT GACCATCACC CCCGCCACCG CAGTCAGGAG 
    CTTCCAGTTC GGCTGCAGCC ACGGCGTGCA GGGCAGCTTC AGCTTCGGCA 
    GCAGCGCCGC CGGGATCATG GCACTCGGCG GCGGGCCGGA GTCACTGGTG 
    TCGCAGACGG CGGCGACCTA CGGCCGCGTC TTCTCCCACT GCTTCCCGCC 
    GCCGACGCGC CGGGGATTCT TCACCCTCGG CGTGCCGAGG GTGGCCGCCT 
    GGAGGTACGT GCTGACGCCG ATGCTCAAGA ACCCGGCCAT CCCGCCCACG 
    TTCTACATGG TGCGCCTCGA GGCCATCGCC GTCGCCGGGC AGCGGATCGC 
    CGTGCCGCCC ACCGTGTTCG CCGCCGGCGC CGCGCTCGAC TCCCGCACCG 
    CCATCACCAG GCTGCCGCCG ACGGCGTACC AGGGGCTGAG GCAGGCGTTC 
    AGGGACCGGA TGGCGATGTA CCAGCCGGCG CCGCCCAAGG GCCCGCTCGA 
    CACCTGCTAC GACATGGCCG GCGTCCGCAG CTTCGCGCTG CCGATGATCA 
    CGCTTGTGTT CGACAAGAAC GCCGCCGTCG AGCTCGATCC GTCGGGCGTC 
    CTCTTCCAGG GCTGCCTCGC CTTCACCGCC GGCCCCAACG ACCAGGTCCC 
    CGGGATCATC GGCAACATCC AGCTTCAGAC GCTCGAGGTG CTCTACAACA 
    TCCCCGCCGC CCTCGTCGGA TTCCGCCATG CCGCCTGCTG AGTCCGGCCG 
    CCGCCCCCGA CGTCTCGATC GGGACTCTAC TACTACAGGC CGGAGCTGCT 
    CTTGCTCCGG TGATACCTTT TAATTTTCAT AAAGCTCGAG CGCTCGCGTC 
    TTTAATTTGA TTCCTCCTAT TTATTTTTGC GTATGCGTAC ACGTGCTACA 
    AGATCAGCTG GCTGGCGTCA TGTATGAGCC AGATTAGCGG TTGCTTTGAT 
    ATGTACTCTT CCATCCATGT GGGTATATAT ATATATATAT ATATATATAT 
    ATATATATAT ATATATATAT GCACGAAGAA ATAAAACTTA ATTTGTTTGC 
    CTATC

    Gene models with high sequence identity

    1. AT5G10770.1 [+] show detail - Eukaryotic aspartyl protease family protein
      E-value: 8e-52; Score: 202.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Peptidase aspartic 2.5e-79
    HMMPanther CHLOROPLAST NUCLEIOD DNA-BINDING-RELATED 3.5e-77
    HMMPanther Peptidase A1 3.5e-77
    Gene3D Peptidase aspartic, catalytic 6.4e-18
    Gene3D Peptidase aspartic, catalytic 1.4e-34

    See the detailed result >

    AT5G10770.1

    Model type
    Protein coding
    Short Description
    Eukaryotic aspartyl protease family protein
    Computational Description
    Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR