K07141

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	low saturation (PATO:0000328) (Seed::Color::pale)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07141

Determination of introduced cDNA(s)

J013168B07 - Rice Full-length cDNAs - Original: J013168B07

full reading [+] show sequence

GTGCACTTAA TGCAACCTTA GTGCAAAAAC CGAAATTTTC CACTCTCTAG 
GTGGTTGTAG TGATAAAATT GCTTTGATAA TCTAAACACA CTGAGTTGCT 
TATGGTTGTT GGGAGGTGCC TAGTGGGCCA GATGAAAGAG ACATCAGCCA 
TCGTGGATGA GTTCCCATAT TCCTCTGTCG GTGGTAGGAA GAGAAAACAA 
AACATTAGCT GTTTACACCT GTTGTACCAG CGCCTCAACC AATTGGAACC 
TTCTAGGGTT TTTCTCATGG CGAGAGAAAG TCCTCCATGT GGAGTTGTAG 
GCTCCTGCTG CGCCTTTTAG TTCCTGAAGA GCTTGCAATT TGTAAGACTC 
TAGTGTAAAC CGTTCATGCA AGCACTCACA TACTGGTTGC AGTTGAGGTC 
TAACAACATG CAGATGCAGT AGTGCTTGAA CTTTAAATAT CATATACTTA 
CTATTCTAAA ATTAGATCAG CAAAAGTGCA TGTCATGTTA AGTTTAGTGC 
CATGCGGACA TTCTATGCAT GCATGATTCA TATAGTATTG TAATGCATGT 
AGGGTGCAGA TTATTATATG AGAATATTCG CTGGTGGATC TAGTTATCTA 
AGTTTCTTTA TCTTCCAATG CCACCATTTT CTTATTTTAC TGTTCAGCTC 
TTATAAAATG TTTTTTCTGT TGGCTTTCGT TGCTGTCTCA TTTATGGATA 
TCTTTACTTT TGGATTGTGC CTTTTAGTGC GCCTATAGTC ATTGTGTGAG 
ATGTTCGGTG GCCATTATTT TTTGCTTGTT AAGTGCTCTG AAGCATATCC 
GGCAGAGGGT TGTCTCGCTA AAAGATTGTC TAATTTATAG TATGCCACCA 
AATAATTCCA AGATAAACAG TATATAGCCA CAAATTCATG TCATGTCTAT 
CGCCCATTAG TCTGAATTTG CACCATGTCC ACATAACTAG AAAGAACAGT 
ACAATAATAA TATTGTGTCC TTGCCTTTTG CACATCCTTT GAGGTCATTG 
TGTTTTAACG GAGAGTCTTT GGTGTGCCTG CCCAGCGAAA AATTTGATCA 
GTCCTACATC TCAGCTTCCA ATGTGTAGCT ACAGACCAAG CGGTTAGGTT 
TCTGTGGGGA ATCAACAGAA TGTTAAAATT GTCCTGTCTT ACCTCACCAT 
CATTGTTCTG AGACAGGGGA ACATGCCTCA CTACTAACCC TCCATGATGG 
AGGGGGTAGA GGAGGGTTGA TGTGAGAAGA ACAGGCGATA TCGGCAATTT 
CATCACTTGG TAGGCTTCTT TATGTTAATT CTGTATAAAC TGATTTTTAT 
CATTTGGAGG TATAAAACCC CCTTTCACAA TGAAGCAAAC CGTTAGCCTT 
AAGGTGCAAA ACCTTTAGAT TCATGAGACA CAAGCATCCA TCCAACTACA 
TCAAACATGT GAAACTCTCA GGTTGCTTCC TGTGTTGACA GTCATATAAA 
GAACATATGA TGGTACATGT GCCAGCCAGT ATTTGCACTT TAGATTTAAG 
CTGAATGAGC TCCTTTTTCA ATGCAATATT TTGGCAAGAT AATAACCAAA 
AATTGACACA TCATTATTAT TTTATAATGT TTTAACTTTT TATTACTACA 
CTTTGTCACT CTCATTGAGG TCCCTTTTTT TTTTCCTTTT TTTTTTTGTA 
AAATCCAGGT TCATATGGTG AAAATGTTAG GAGAAAGTCC CACACACCTT 
CTGCTATTGT TATCGGCAGT GGGTTTGCAG GCATTGCTGC AGCCAACGCT 
CTCAGGAATG CATCATTTGA GGTTGTTCTT CTAGAATCTC GTGACAGGAT 
AGGTGGTAGA ATTCACACTG ATTACTCTTT TGGCTTTCCT GTTGATCTGG 
GAGCATCCTG GCTTCATGGT GTTTGTGAGG AAAATCCCCT GGCACCAATT 
ATTGGAAGGC TTGGACTTCC ACTGTATCGC ACAAGTGGAG ATGACTCTGT 
GCTGTTTGAT CATGACCTTG AGAGGTTACT AGAGCTAGTT TATTTTGTAT 
GTAACTTGAG AGATGATGGA CCATAATAAT CAACCATTTA ACATGTTTTT 
TCCCTCAGTT ATGCTCTCTA TGACACTAAG GGCCATCAAG TTCCCCAAGA 
GCTGGTAGAA AAGATAGGGA AGGTTTTTGA GACTATATTG GAAGAGACTG 
GCAAACTGAG GGAAGAAACT AAGGAAGACA TTTCTATTGC GAAGGCCATT 
GCAATTGTTA TGGAGAGAAA TCCACACTTG AGGCAAGAAG GGATTGCTCA 
TGATGTTCTT CAGTGGTATT TGTGCCGCAT GGAAGGTTGG TTTGCTACTG 
ATGCGGACGC AATCTCTCTT CAGGGTTGGG ACCAGGAGGT ACTGCTTCCT 
GGTGGCCATG GTCTCATGGT TCGTGGATAT CGTCCAGTAA TAAATACTCT 
GGCAAAAGGC CTAGATATAC GCCTTGGCCA CAGGGTTGTT GAGATTGTTC 
GCCACAGGAA TAGGGTGGAG GTTACTGTAA GCAGTGGTAA AACATTTGTT 
GCGGATGCTG CAGTCATTGC TGTCCCCTTA GGTGTTCTTA AAGCAAACAC 
CATTAAATTT GAACCTAGGC TGCCAGAGTG GAAGGAGGAA GCAATAAGAG 
AACTCTCAGT TGGAGTCGAG AACAAAATAA TTCTCCACTT CAGCGAGGTT 
TTCTGGCCTA ATGTGGAGTT CCTTGGAGTA GTTTCATCCA CCACATATGG 
CTGCAGCTAT TTCCTCAACC TCCACAAGGC TACTGGCCAT CCTGTTCTAG 
TTTACATGCC TGCGGGTCGG CTTGCATGTG ACATTGAAAA GCTGTCAGAT 
GAGGCTGCTG CCCAATTTGC CTTCTCTCAG CTGAAGAAGA TCCTGCCCAA 
CGCTGCCGAG CCGATACATT ACCTAGTGTC ACATTGGGGC TCAGACGAGA 
ATACACTTGG ATCCTACACC TTCGATGGGG TGGGCAAACC TCGTGACCTG 
TATGAGAAGC TGCGGATCCC AGTCGATAAC CTATTCTTTG CTGGAGAAGC 
CACCAGTGTC CAGTACACTG GCACGGTGCA TGGCGCCTTC TCCACTGGTC 
TGATGGCAGC TGAGGAGTGC CGAATGAGGG TTCTTGAGCG GTTCAGGGAG 
CTGGACATGC TGGAGATGTG CCACCCTGCA ATGGGGGAGC AGACCGCCAC 
TGTCTCAGTC CCACTGCTCA TCTCCCGGCT GTGAACAGAC CAGGAGCTGC 
ACAAAAATTA TAGTCTTCTA AGGCCATTTG GCACTTGGCA CCCGGCGAGC 
GCACTAAGCC ATTCCCCTGA TTGCTCGAGG AAGGCAGCAT TGGAGCAATT 
ATCTTATTTG CTTCTCCTTG GCATGAGGAG TGTGCTGGTG CAGCTTGCGG 
TGCGCTAAAT AAAGTCACTG TGAAAATGGA GTGTGGGAGT CTGGTGTGTA 
TTGTTGAGTA TAAAATGAGG GAGTCAATAT GTAGTTAAGC AGGGATTACG 
GACAATGTGA GCCATCATTA CTGAACAAGA TGGTGTATGT GTGACGAACA 
ATTAATTTAA ACGATCGATA TTGAAAATG

Gene models with high sequence identity

AT2G43020.1 [+] show detail - polyamine oxidase 2
E-value: 0; Score: 672.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Amine oxidase	1.9e-20
HMMPfam	Amine oxidase	8.1e-67
HMMPanther	AMINE OXIDASE	6.1e-67
HMMPanther	AMINE OXIDASE	6.1e-67
HMMPanther	AMINE OXIDASE	8.5e-236
HMMPanther	AMINE OXIDASE	8.5e-236
Gene3D	no description	2.3e-22
Gene3D	no description	3.7e-41
superfamily	FAD/NAD(P)-binding domain	1.5e-19
superfamily	FAD-linked reductases, C-terminal domain	3e-26
superfamily	FAD/NAD(P)-binding domain	7e-24

See the detailed result >

AT2G43020.1

Model type: Protein coding
Short Description: polyamine oxidase 2
Computational Description: polyamine oxidase 2 (PAO2); FUNCTIONS IN: primary amine oxidase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 6381 Blast hits to 5960 proteins in 1057 species: Archae - 96; Bacteria - 2371; Metazoa - 1412; Fungi - 575; Plants - 752; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink).
Link: InterPro Scan - TAIR