K07143

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	rosette leaf (PO:0000014)	decreased width (PATO:0000599) (Rosette leaf::Shape::narrow) present in fewer numbers in organism (PATO:0001997) (Rosette leaf::Number::few)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin)
	stem internode (PO:0020142)	decreased length (PATO:0000574) (Stem::Shape::short internode)
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) low brightness (PATO:0000327) (Seed::Color::dark)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07143

Determination of introduced cDNA(s)

J023063N13 - Rice Full-length cDNAs - Original: J023063N13

full reading [+] show sequence

GAATCCCTGA TCGATGCTGC AATCGCACCA TCATCGCTCC TCTGGCCATG 
ATCCGTGCAT GCAGCACAGC TGCATTTCGT CGGTTTCTCG AGCTTTCCGT 
TGATCTTGAT GCGTTCTTGA TCTCAATCGC CGCCGCCGCC GCCGCCGCCG 
TCGCGGGAGG AGGAGGAGGA GATTAAGCAT GAGGCAGACG CGGCACGGCG 
GAGCTCTACA CCGATGGTTT CACTGAAGCT GCGAGCCATC CTCTTCCCGT 
TCCAGATGGA GCCTCGCCGC GAGATGCTCC TGCAGGAGCT TGGGGAGATG 
TGGGACCAGA TCGGGGAAGC GGAGGAGGAT CGGCGAGAGA TGCTGCACGC 
GCTGGAGGAG GATTGCCTCA ACGTGTACAG GGTGAAGGTG GCGCAGGTGA 
AGCAGTACAG GGCACAGCTG CAACGGGAGA TAGCCGACTC CGTCGCCGAG 
GTCGCCGCCA TCTGCGCCAC CATCGGCGAG CCATCCACCA CCGTGCACAT 
TGCGTGCTCC TCGCTGCAGA GCACAGGGAA CCTCAAGGAG GAGCTCGGCT 
CGATCACGCC GGAGCTGGAG GAGATGAGGA GGAGGAGGGA GGAGAGGCGG 
CGGAAATTCT CGGAGGTGAC GGAGCTCATC AACAGGATCG AGCAGGAGAT 
GAAGCCGAGC AAGCAGCTTC ATCTCACCAT GGACAACTCC GACCTCACCA 
TCAGACGGCT TGAGGAGCTC AGAGCATACC TGCAAGATCT GCAGCTGGAG 
AAGGATAGTC GCGTCAGGAA GATGACAGAG CTGATGGGTT CTCTGCATTC 
CTCCTCCTTG GTTCTTGGCA TGGATTTCAG AGAGACCAAC CTTCATCATG 
ATGATGAAGG AGACATCAGC GACGATGCAA TTGCAAGATT AGTTTCCGAG 
ATCGGGAGAT TGAGAGAGAT CAAACGGAAC AGGATGCAGA AGCTGCAAGA 
CCTCTTGGCC ACCATGCTGG ATCTGTGGAA CCTGATGGAC ACGCCATCGG 
AGGAGCAGAA GAGGTTCCAG AGCGTGGCGT GCAACATCGC CGCGTCCGAG 
GACGAGATCA CCGAACGGGA TGCTCTCTCC ATGGAATTCA TCAACAATGT 
GGAAGCAGAG GTGGTAAGGC TGGAGAGGCT CAAGGAGTGC AGGATGAAAG 
ACCTTGTACT GAAGAAGTAT GATGAGCTCA ATGAGATACG ACGGCGAGCG 
CATGTACCCG TCGAGAACGA AGACGATGCG ATGATGATGT TCGACGCCAT 
CGACAGTGAT GCCAAACGGT CTCTAATCCT GGAGCGGCTG GAAGTGCAGA 
TCTCTGAGGC CAAAGATGAG GAGTTCAGCA GGAAGGATGT TCTTGAGAAG 
ATGGAGAAAT GGCAGGCTGC ACTAGAAGAG GAATCTTGGC TTGAGGAGTA 
CAACAGAAAT GAGAACAGAT ACAATGTGGG CAAAGGGACT CATCTTGTGC 
TGAAGCGTGC CGAGAAAGCG CGTGCCTTGG TCAGCAAAAT GCCAGCAATG 
GCAGAGGCCT TGATCACAAA GGTAATTGCT TGGGAGAAGG AGAGGGGTGC 
CAAATTTGAG TACGATGGTG ATGGTCTCCT GGACATGCTG GAGGAGTACA 
ACAATACAAG GAAGGAGAAA GAGCAGGAGA GAAAGAGACA AAGGGATCAG 
AGAAGGATGC TGGGTCAGGG CACAGGGGAG TCGCCGGTGG TGAGGCCTCC 
GCCCAAGAAC ATCAAGAATG TAACGAGGAC GTTGTCTATG GGTGGCACTA 
GTACGGGCGG CAAGAAGGCG TCGGCATCGG TGTCGTCGAG GCCAAGCACG 
CCGAGCTTCC TCAAGTCACC TATGTCAGCA CGAAGGAGTG ACGAGGGACA 
AATGTTATTG TCACGCGCAG TTGAGGAAGA TGATTTGTTA TAGCCAATTG 
ATAGAATATT ATTTACAATA GAAAGTATTA GTATTAAAGT TTTTTTGTAG 
ATTTTTTTAT AGTTGTTTTT AAGCCTTCTT TATTATAGAG ACTTTAATGC 
AAAAGTTATA TCTTGTGAAA TGTAAAAATG CTATGTTCCG AGTGAGCACT 
TGTTGTTAAA GTTTTTTATA TAAATATGTT TTGTTTTAGG G

Gene models with high sequence identity

AT5G51600.1 [+] show detail - Microtubule associated protein (MAP65/ASE1) family protein
E-value: 6e-101; Score: 365.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	Microtubule-associated protein, MAP65/ASE1-type	2.1e-76
HMMPfam	Microtubule-associated protein, MAP65/ASE1-type	5.7e-63
Coil	coiled-coil	0
Coil	coiled-coil	0

See the detailed result >

AT5G51600.1

Model type: Protein coding
Short Description: Microtubule associated protein (MAP65/ASE1) family protein
Curator Summary: Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.
Computational Description: PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink).
Link: InterPro Scan - TAIR