K07232

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07232

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07232

Determination of introduced cDNA(s)

J033052J24 - Rice Full-length cDNAs - Original: J033052J24

full reading [+] show sequence

GGTAGCAGCA GTTGTACCAT AGCAATGTTG GGCGGCGACG GGAGAACGAA 
GACGGTGTGC GTGACCGGCG CCGGGGGCTT CGTGGCGTCG TGGCTCGTCA 
AGCTCCTCCT CTCCCGCGGC TGCTACACCG TCCATGGCAC CGTCCGTGAT 
CCAGGCGACG CCAAGAACGC CCACCTGATG TCTCTGGACG GCGCCGCGGA 
GAGGCTGCGG CTGTTCAAGG CCGACCTGCT CGACTACGGC AGCGTGGCGG 
CGGCCATCGC CGGCTGCGAC GACGTCTTCC ATGTGGCCTG CCCCGTGCTC 
CTCTCCGCCC CCAACCCAGA GGTTGATATA CTTGCTCCTG CTGTAACGGG 
CACGACGAAT GTGCTGAAGG CTTGTTCAGA AGCTAAGGTT GGGAGGGTTG 
TGGTGGTGTC ATCTGTCTCT GCTGCGATGG TGAATCCTAA CTGGTCTGAG 
GGCAAGGCCA TAGATGAAGA TTGCTGGTCT GATGTCGATT ACTGCAGAGC 
CACTAAGAAT TGGTATACCC TTGGGAAAAC ACTTGCGGAG ATTGAGGCCT 
TTGATTATGC GAAGAGAAGT GGATTGGATC TTGTGACACT CTGCCCATCG 
TTGGTGATTG GACCTTTGCT GCAACCAACT GTGAATGCGA GCAGTACAGT 
CATACTTGGA TGTCTGAAAG GTGATTGTGA GGTAAAAATC AAACTGAGGA 
ACTTTGTGGA TGTCAGGGAT GTTGCCGATG CTCTTCTTTT ACTGTATGAA 
ACCCCAGGGG TCTCCGGACG ATACATCTGC AGTTCACACG CAAGAAGGAT 
GCCTCATATC ATTGACTTAC TAAAGAGCTG GTATCCCGGT TACAAATTTG 
CCGACAAGTT TGTGGAAGTG AGCGATGAGC CGCAATTCAA CTCGGGGAAG 
CTAGAGAAGC TAGGATGGAA AATCAAGCCA TTTGAGGAAA CACTCAGGGA 
CAGTGTTGAA TCTTATAGAG CTGCAGGTGT CCTGGATTGA GCAAATGGTG 
TCCTGTGTAT ATACCAACAC AATTGAAGGA ATTACCAACA CATTGATCGG 
GTTCTAGGCT TAGTTTAATA GATCTACTAC ATAGGTGTTT GTTTTGATCG 
ACCTTAATTG GATCTGGCCT CTTTGGCAAC ATCTGTATGT AAGAGCTGCC 
TATTTGGCAG CAGCTGGGAG TAGAAGATAA AATTATCTTT TGGTGATGGA 
TTTGCGCTGA GAATTATGCC ATTTATGCCC TG

Gene models with high sequence identity

AT2G33590.1 [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
E-value: 3e-90; Score: 328.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	CINNAMOYL-COA REDUCTASE	5.3e-136
HMMPanther	NAD DEPENDENT EPIMERASE/DEHYDRATASE	5.3e-136
superfamily	NAD(P)-binding domain	1.1e-60
Gene3D	NAD(P)-binding domain	1.4e-38
HMMPfam	NAD-dependent epimerase/dehydratase	1.9e-23

See the detailed result >

AT2G33590.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: response to cadmium ion, lignin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G33600.1); Has 13062 Blast hits to 13044 proteins in 1974 species: Archae - 275; Bacteria - 5592; Metazoa - 467; Fungi - 894; Plants - 2514; Viruses - 60; Other Eukaryotes - 3260 (source: NCBI BLink).
Link: InterPro Scan - TAIR