K07306

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07306

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07306

Determination of introduced cDNA(s)

J033128M15 - Rice Full-length cDNAs - Original: J033128M15

full reading [+] show sequence

AAGGTGATCA ATCGGCGGAA AATGCAATTA CTTGGTGTCG CTTGCCTGCT 
TATAGCTTCT AAGTATGAAG AGATATGCCC ACCCCAAGTA GAAGAGCTCT 
GCTATATTTC TGACAATACA TACACTAAGG ATGAGGTTTT GAAAATGGAA 
GCTTCTGTCC TGAAATACTT GAAGTTTGAG ATGACTGCAC CTACAACAAA 
ATGCTTTTTG AGGAGATTTC TACGAGCTGC TCAAGTATGC CATGAGGCTC 
CAGTTTTGCA TCTTGAGTTC CTAGCTAATT ACATTGCGGA GCTATCACTT 
CTGGAGTACA GCTTAATTTG CTATGTACCG TCACTTATAG CTGCGTCTTC 
TATTTTCTTG GCGAAGTTTA TCCTTAAGCC AACAGAGAAT CCTTGGAATT 
CAACACTTTC ATTCTACACA CAATACAAAC CATCCGACCT ATGCAATTGT 
GCAAAAGGAC TACACCGGCT TTTCTTGGTT GGCCCTGGAG GCAACCTTCG 
AGCAGTTAGA GAAAAATACA GTCAACACAA GTACAAATTC GTAGCAAAGA 
AGTACTCTCC ACCATCAATT CCAGCAGAGT TTTTCGAAGA TCCAAGCAGC 
TACAAGCCTG ATTAACTCCA GTTACTCCCT GAAGTCTTGC AGTAGCCCCG 
AATGGTAGGC TGATTTGTAC AGATTGCTCA TGCGCAAGGC AAGCACACGC 
CACGCGCCCT TGTGTTAGCA GATTGGTAGA TTGTACATTG TAGATGAAGT 
GGTAGAGCTG TACATCAAGT TGGCCTCATT TGTGTATGCA CGGCAAGTGC 
ATTTCTCTGG CGGCGGCTTG CTTACAACCA CAGTGCATAA AGCTGCTAGT 
CCTTTCCTAC TCTATCCATT TTGCTTGCTC CAAGCTTGTT TGATATGATT 
TTACCGTGTT ACTGTAAACA AAATGGATAT GCTGGATAAG AGATAAATGC 
CTGAGGGCAA GTGAAGTATG AATATATTTG TCCTTCTCAG TGGGATG

Gene models with high sequence identity

AT1G44110.1 [+] show detail - Cyclin A1;1
E-value: 1e-75; Score: 280.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Cyclin-like	3e-40
superfamily	Cyclin-like	2.1e-22
HMMPIR	Cyclin, A/B/D/E	4e-15
HMMSmart	Cyclin	0.58
HMMSmart	Cyclin	3.3e-19
HMMPanther	G2/mitotic-specific cyclin A	3.2e-105
HMMPanther	CYCLINS	3.2e-105
Gene3D	Cyclin-related	6.7e-42
HMMPfam	Cyclin, C-terminal	1.3e-31
HMMPfam	Cyclin, N-terminal	5.2e-22

See the detailed result >

AT1G44110.1

Model type: Protein coding
Short Description: Cyclin A1;1
Computational Description: Cyclin A1;1 (CYCA1;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A1;2 (TAIR:AT1G77390.1); Has 4548 Blast hits to 4417 proteins in 376 species: Archae - 0; Bacteria - 4; Metazoa - 1999; Fungi - 561; Plants - 1168; Viruses - 34; Other Eukaryotes - 782 (source: NCBI BLink).
Link: InterPro Scan - TAIR