K07348

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	cauline leaf (PO:0000013)	decreased size (PATO:0000587) (Cauline leaf::Shape::small)
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) increased width (PATO:0000600) (Rosette leaf::Shape::wide) present in fewer numbers in organism (PATO:0001997) (Rosette leaf::Number::few) abnormal (PATO:0000460) (Rosette leaf::Others)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin) abnormal (PATO:0000460) (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07348

Determination of introduced cDNA(s)

J023099F08 - Rice Full-length cDNAs - Original: J023099F08

full reading [+] show sequence

GACCGTCGTC TTCCCCGCCG GCCGCCGCTC CCCTCCTCGC CACCGCCGCC 
ATGCCTTTCC ACTTCCAATT CCCATGGCTC CCCAACAACC CCACCTCCTC 
CTCCTCCTCC CCAACGAAAC CACCTAGCCC TGCAATCCCC AACCCCTTCC 
TCCCCATCCA GGCCGGCCTC GCCTCCTTCC TCTCCTCCCT CCCGCTCCCA 
CGCGCGGCCT TCCCGCCGCC GCCCTGGGCT CGCATCTCCT CCGCCTCAGC 
CTCCGCGGCC TCGGCCTCGG CTCTCCCCGT GGCGGAGATC GAGGAGCGGC 
TCGCGGGGGT CCCCGTGTAC GCGCTCGCCA ACTCCTCGCA GGAGTTCGTG 
CTCGTGTCGT CCGCCCGCGG TGGGGGTGGG GGTGGGGGAG GTGCCCGGGC 
GGCGGTGCCG CCGCCGGCGC TCGGGCTCCT GTGCTTCCGG AGGGAGGACG 
CCGACGCCCT CCTGGCGCAG ATGGACGGGG ACATGGCGGC TGGCTCCACC 
GTCGTGCCCG TCGCGCTAAA CAAGGTTATC CAACTTAAGT CCGATGGTGT 
GGCATTTAGA TTTGTTCCTG ATTCTTCTCA GGTGGCAAAC GCAATGAAGT 
TAATGGAAAA TGAAGGCCAG TATGTGAATG ATGGATTTCC AGGGGTTCCA 
GTTTTTCAGT CAAGGAGTCT AGTCCTGATG AGTTATAACA AGAGATATCG 
TCCAGTTTTC TTCAGAAAGG AGGACTTGGA TAACTCACTA CATCGAGCCT 
CTCGTGACCA GCAAAAGCCT AACCCTGCTG TAAAAATGGG TGACATTCAG 
GTTTCTTCTT TGGAGAATAT CATCAAATCT ATGAAGGATA GCTCCTCTTC 
CAAATGGGAT GATGCTGTTT TTATTCCTCC AGGATTTGAT CTTGCTACTA 
GTTCAAAGCA ATCGAATCAT GACAACTAGA TCTTTATTTA TGTTGAAGCT 
GCTTAACTGC TCTTGTCATG GAAATGCTTA CATGAACATA TTGAAGAAAT 
AGAATACATG TTCATACCAT ACTAGCAACT TGATAATGGG TAATGCAATT 
ATAAGTTTGT CGTTCCCT

Gene models with high sequence identity

AT3G23710.1 [+] show detail - Tic22-like family protein
E-value: 3e-40; Score: 162.00

InterPro Scan Digest

Program	Description	E-value
Coil	coiled-coil	0
HMMPfam	Tic22-like	2e-87

See the detailed result >

AT3G23710.1

Model type: Protein coding
Short Description: Tic22-like family protein
Computational Description: Tic22-like family protein; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tic22-like (InterPro:IPR007378); BEST Arabidopsis thaliana protein match is: Tic22-like family protein (TAIR:AT4G33350.1); Has 104 Blast hits to 104 proteins in 42 species: Archae - 0; Bacteria - 39; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link: InterPro Scan - TAIR