K07349

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07349

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07349

Determination of introduced cDNA(s)

  • J033091H20 - Rice Full-length cDNAs - Original: J033091H20

    full reading [+] show sequence

    Nucleotide sequence: J033091H20 - full reading 
    GACGGCGCCT ACTACTCCTA CAACAGAAGA CGAGCTCGCC TCGCCGCCGC 
    CGCCATCGCC ACCACCACCC GCAGCTCTCC TCGTCGCGTC GTCCCGCACC 
    TCTCGATCTC CAACGACGCG GGGGCTTGCC GGCGCGGCGC GAGTTGACGA 
    CGACTCGCCG GCTGTAGCAG GCAGCAGCAG CAGTAGAGAG ACGAGACAGG 
    AGTGAGTGGT GATCGCCGCG GTTGGGTTTC TTGGATTGGG CTGTGGCTGG 
    CGTTGGTCGG AGGAGCCAGG AGGAGGTTCC CTCTCGCTTT GCTCGCTCGC 
    TCGTTCGTTC TTGGCTGGGT TTGGTTTGGT TTGGTTTGGT CTCGGTTCAG 
    ATCTTCTCTC CAAAGATTGG GATTCTGTTG GTAGGGGGGG GAGGGAAGCC 
    ATTTTCTTGT TTCGATGGAC GCTCGGTAGA TCGGTAGGTA GATGGGGAAC 
    TGCATGGACA CCGCGGCGGC GGCGGCGGCG GCGCCGGATA CCAACAACGC 
    CGATCCATCA AAAGCTGCTA GCAAGACAAC CTATTCATCT TACCCTTCAA 
    CTACAAAAAG CGGTTCATCT TGGACTGTAC CTTCCTATAA GGATCGTAGC 
    GACCTTCCTA CTCCTAGGAC AGAAGGAGAA ATTTTATCAT CGTCAAATTT 
    AAAGGCATTC ACACTGAGTG AACTCAAAAA TGCAACAAAG AACTTTAAGC 
    CCGACAGTCT CCTTGGGGAA GGAGGATTTG GCTATGTCTA TAAAGGTTGG 
    ATCGATGAGC AAACTCTTGC TCCTGCAAGG CCAGGGAGTG GTATGGTTGT 
    GGCCGTCAAA AAGTTAAAAC CAGAAGGTTT TCAGGGTCAC AAGGAGTGGC 
    TGACAGAGGT TGACTACCTT GGCCAACTTC ACCATGAGAA TCTTGTTAAA 
    CTCATTGGTT ATTGTTCAGA TGGTGATAAC CGACTTCTGG TGTATGAGTA 
    CATGCCTAAA GGAAGCTTGG AGAATCATCT ATTTAGGCGT GGTGCAGATC 
    CTTTATCCTG GGGAATAAGG CTCAAAGTTG CTATTGGGGC TGCTAGGGGT 
    TTATCATTTT TGCACGATGC TGAAAATCAA GTTATATATC GTGATTTCAA 
    GGCATCAAAC ATTCTCCTTG ACTCGGAGTT CAACGCAAAG CTTTCAGACT 
    TTGGTCTGGC AAAAGCAGGC CCAACTGGGG ATAGAACCCA TGTTTCCACA 
    CAAGTCATGG GTACCCGAGG TTATGCAGCT CCAGAATATG TTGCAACAGG 
    TCGCCTCTCT GTAAAGGCAG ATGTCTATAG CTTTGGTGTT GTGCTGCTCG 
    AGTTATTGAC TGGGAGACGG GCCTTAGACA AATCGAAACC AGCATCAGAA 
    CAGAACCTGG TTGACTGGAC AAGACCCTAC TTGGGTGACA AGCGCAGGCT 
    GTACCGCATC ATGGACATGA AGCTGGGCGG ACAGTACCCT AAGAAAGGCG 
    CCCACGCTAT CGCGACCATT GCCCTGCAGT GCATCCGCAG CGAAGCCAAG 
    ATGCGACCCC AGATGTCCGA GGTCCTGTAG AAGCTGCAGC AGCTGCAAGA 
    CCCCAAGTAC AACGTGACCT CACCGCAGGT TGACACCCGG AGGAGATCAT 
    CGTCGGGTTC AGTTCCTAGG TCGCCGATGC GGATGCAGCC TTCGCCACGG 
    CGCCTTTCCG CCTCGGCTTC CCCATTGCCG GCTGCAGGCT CCCCGCTGCC 
    GGCTTGTAGG ACTGCGCAAG TGCACTAGAT GCACAGCCTA GGATAGTTTG 
    GAACTTCGTG CTGTAGTTGT TTGTAACCTC TAGCTGTATA TTTTGTTTTG 
    ATGTTGTGCC CAATCTGTAG TTCTTTGTTT TGTGAGGTTG GATACATCTG 
    TTGCTGTTAG ACTCCGATGT GTGTGTAACA GGGAACGTGA TTCCGGCATT 
    CTGACGCGAT CATTATTTTT TTTTACTTGT TTCAATAGAT AAATGGATTC 
    TT

    Gene models with high sequence identity

    1. AT2G02800.2 [+] show detail - protein kinase 2B
      E-value: 4e-150; Score: 528.00

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan Protein kinase, catalytic domain 38.577
    HMMPfam Serine-threonine/tyrosine-protein kinase 9e-47
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 1.4e-166
    superfamily Protein kinase-like domain 4.5e-79
    HMMSmart Serine/threonine-protein kinase domain 7.2e-39
    HMMSmart Tyrosine-protein kinase, catalytic domain 1.2e-28
    Gene3D no description 7.2e-23
    Gene3D no description 2.4e-48
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0

    See the detailed result >

    AT2G02800.2

    Model type
    Protein coding
    Short Description
    protein kinase 2B
    Curator Summary
    Encodes protein kinase APK2b.
    Computational Description
    protein kinase 2B (APK2B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2A (TAIR:AT1G14370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR