K07406

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07406

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07406

Determination of introduced cDNA(s)

  • J033108P10 - Rice Full-length cDNAs - Original: J033108P10

    full reading [+] show sequence

    Nucleotide sequence: J033108P10 - full reading 
    GGTCGTGCGC CTCCTCCCCG CGGCGACGGC TTCCGCGAGC CGCGTAAACC 
    CTAACCCTAA ATCGGTAAGC GAAGCAGCGG CAGCGGCAGA GGCGGCGGCG 
    GAGGAGGAAG GTGGCGATGG CGGCGAAGCG GGAGCTCTCG AGCACCCTCA 
    GGAACCTCAA GTTTATGCAG CGGGCGGCTG TTGCGCAGAA GGTTGAGGAG 
    AAGCCCAAGG TTGAGGCGGC GGCGGCGGCG GCGGAGGAGG AGGTGGTGAC 
    GGTGCCTAGC GGAGGTGTTG GCTCGTCGGT TAAAGTCGCT CGGAAGTGCG 
    TAGTTATCAT GGAGGGTAAT CCACACCCTG GAGCTGCAAA GGGTCGAATG 
    TCATTCCTGA ATTTCAACCC ATCCATTGAT AAATTAACTC AAGAGGCAAC 
    GGGTGGCCGC CAATCACAGT TAGCATCACC TAGTAATAAT CATCAGGATG 
    GTTCGAATTC CAGCAGAACG GATGAAGTAT CAAGAACAAG ATTTAGTGAC 
    TTCAACATTG ATAGTTCAGA AAGCATATCT CTGAATGAAC TAAAGAGGAA 
    ACAGCCTGAG CTTGAAATGG AAACACCACC ATCACATAGG CAGCCCAAGA 
    CCACAGGTAA GAGTATCGAT GGTGATTCAT CTTCCCAAAG CAATGGCCGT 
    GGGTCTCACA AGTCAAACAA GCGTGAAAAG CTTGACTGGA ATCTTCTTAG 
    ACCACGGAAA TCAAAATGAA GTCCGGAGTT AGCGTAGCCA AAACTTTGCT 
    CTTGTACCCC ATTTGTACTC TGTATCTGAT TAGCATTTTC TCCTGTTTCG 
    CGAGTTATAT CTAGAAAGCT GGTAACCAGT AGTTTATTTA CAGTAAAATG 
    TTTGTCCTTG CCTAATCTTG GTTTCAACTG TTCCCCTGTT CTTGATATGT 
    TGTTTACTGC ATTACTTTGC TGTAACAAGG TTCTGCAGCA GCAATGAGAA 
    ATTACAGTTT TG

    Gene models with high sequence identity

    1. AT5G59460.1 [+] show detail - scarecrow-like transcription factor 11 (SCL11)
      E-value: 2e-18; Score: 90.10

     

    InterPro Scan Digest

    See the detailed result >

    AT5G59460.1

    Model type
    Protein coding
    Short Description
    scarecrow-like transcription factor 11 (SCL11)
    Computational Description
    scarecrow-like transcription factor 11 (SCL11); CONTAINS InterPro DOMAIN/s: M-phase phosphoprotein 6 (InterPro:IPR019324); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR