K07502

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	cauline leaf (PO:0000013)	abnormal (PATO:0000460) (Cauline leaf::Others)
	rosette leaf (PO:0000014)	epinastic (PATO:0000945) (Rosette leaf::Shape::epinastic) present in greater numbers in organism (PATO:0000470) (Rosette leaf::Number::many)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07502

Determination of introduced cDNA(s)

J023102F19 - Rice Full-length cDNAs - Original: J023102F19

full reading [+] show sequence

GGTTAAAGAT GATGAGGCTG GGAAGGGCGC CCTGCTGCTA CTGCTTCACC 
GAGCCGCACC CCGCCGGCGG CGTCGCGGCC GCCGTCAGGC TGCGACTGCT 
GCCGCCTGCC CGCGCCGCGA ATACCTCCTC AGAGCCGGCG GCGCGGCTGA 
GGGCGGTTCT CGAGCAGGTG GACGAGGAGC TGCGGAAGGG GAACGACGAG 
GCCGCGCCGT CCCTCGTGCG CGGCTCGCAG GGGGCGGATG GCGGGCTCCG 
GTTCTTTGGC GCGGCGAGGC AGGTACCTCA AAGACTTTAT ACATTGGATG 
AGCTGAAGTT AAATGGGATC GATACTTCTG CTTTCCTATC TCCTGTTGAT 
CTGACTTTGG GATCAATTGA GAGAAATCTC CAAATTGCTG CAGTTCTAGG 
AGGGCTCTCT GTATCAGCTG CATTCGAGCT TTCTAAACTC CAAGTTCTGT 
TTCTGTTTTT GGGTCTACTA TCTCTGTGGT CGGTGGATTT GGTATATTTC 
GGTGGTGGAG TGAGAAACTT GATTCTTGAT ACAATTGGTC ACAATCTTAG 
CCAGAAGTAT CGTAATAGAG TTATTCAGCA CGAAGCTGGC CACTTCTTGA 
TAGCGTATTT GCTTGGGGTC CTTCCCAAAG GATACACTAT CACAAGTTTA 
GATACATTCA TAAAAAAGGG CTCACTGAAT GTGCAAGCTG GGACAGCTTT 
TGTTGACTTT GAGTTCCTTC AAGAGGTCAA TTCAGGCAAA CTATCTGCCA 
CGATGTTGAA CAAGTTCTCA TGCATTGCCT TGGCTGGAGT AGCAACAGAG 
TATCTTTTGT ATGGATATGC TGAAGGAGGA CTAGCTGACA TTGGGCAACT 
AGATGGATTG CTCAAAGGTC TAGGTTTCAC CCAGAAGAAA GCTGATTCAC 
AGGTGAGATG GGCTGTGCTG AATACTGTAC CTGCACTGCG TCGCCATAAA 
AAGGCCAGAT CACAGCTCGC GGAGGCAATG TCCTCTGGGA AGTCAGTTGG 
ATCTTGCATC GGGGTCATAG AAGAGAATAT AAACTCTGAG GATATTTAGT 
TAGTGACTAT AAAGATGATG GAAAATATAG ATCACATATG TACAAACTTT 
CACAATGGAC TGTACCTTTT AACTTGGGCT TTGTATTTAG TCTGTTAGCA 
GGAAATACAT GTCAAAATCA TGGTTTTTAT TCAGTTTCAT ATATTAAACG 
TTT

Gene models with high sequence identity

AT5G27290.1 [+] show detail - unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13...
E-value: 4e-107; Score: 385.00

InterPro Scan Digest

See the detailed result >

AT5G27290.1

Model type: Protein coding
Computational Description: unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR