K07519

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07519

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07519

Determination of introduced cDNA(s)

J023012I24 - Rice Full-length cDNAs - Original: J023012I24

full reading [+] show sequence

TGGGATCTCG CCTCGATCGC GGCGGTGGCG GTGGGGAGGG GAGCGCACCG 
CCTGCCCAGC CATGAGATGG TATGCTTCGC TAGCCTGAGG AGGGCTCTGC 
CTCTGCTGCT GCGCGCCACC ACCACCACCA CCCCCCGCTT CCTTCTCCCC 
AGGGCCCTCT CCGGCGGCGT TGGCGGCGGG GCGGCGGTGG ATGCGCGCGC 
GCTTCTCCGT GGGCACAGCG GGTGGCGCGG GCTCCGGGTG GCCGCCAGGA 
TGATGCTCGA CTCCTCCGAC TCCGCCGCCG CTGCGGGGCA GATGCAGCCG 
CAGCAGCGTG CGGCGGGGGC CGTCGCCTGC AGCGCGCAGG ACGGTGGTGC 
CGCAGGGTAC GCCAGCGGCG GGTGGGCGAG AGAAGATGGT AAACTGAAAT 
GTGGATATTC AAGTTTTAGA GGGAAGAGAG CCACCATGGA GGATTTCTAT 
GATGTAAAGT TAACTGAAAT CGATGGACAG GCTGTTAGCC TATTTGGTGT 
ATTTGATGGT CATGGAGGAC CACGTGCTGC TGAGTATTTG AAGGAAAATT 
TGTTCGAAAA TCTTCTGAAA CACCCTGAGT TCCTGACAGA TACAAAGCTT 
GCCATAAGTG AAACATATCA GAAAACAGAT ACAGATTTCT TAGAATCAGA 
ATCCAATGCC TTCAGGGATG ATGGTTCAAC AGCTTCCACT GCAGTTTTGG 
TGGGTGGCCA TCTATATGTA GCAAATGTTG GTGATTCCCG TGCTGTTGTT 
TCAAAAGCTG GTAAAGCTAT GGCACTGTCA GAAGATCACA AACCTAACAG 
GAGTGATGAG CGGAAGAGAA TTGAAAATGC AGGAGGAGTT GTCATTTAGG 
CTGGTACTTG GAGGGTAGGA GGTGTACTGG CAATGTCGCG TGCATTTGGC 
AATCGTCTAC TGAAGCCATT TGTGGTGGCA GAGCCTGAAA TTCAGGAAGA 
ACTTGTCAAT GAAGACTTGG AATGCCTCGT TCTTGCTAGC GATGGACTTT 
GGGATGTCGT GGAAAATGAG GAAGCTGTTT CCCTTGCGAA AACAGAAGAC 
CTGCCTGAGT CGGTGGCTAG GAAACTCACG GAAATAGCCT ATTCTCGAGG 
CAGCGCTGAC AACATTACAT GCATCGTGGT GCAATTTCAC CATGATAAAA 
CTGAATAATA AGATGGGACT AGAGCTGATG AAAGGTTGAA GGTTTTTCTA 
CTTCAAGCTA CTTTCCAGCA GTCCAACCAC AGAGGGGGTT CCCCAGGAGA 
TGTTGCTCCT GTAGCATTTG CTAAGGATTG TTTCGTTGAT TCTTTTCCTT 
GTGTAGGAAT CATTTTTTGT TTTCAGAGGT GTTACGAACA GAAAATTTTA 
TTTCGAGTGT AACACACAGT TTTAATTGGA TGGATACTAA TAAATCAATT 
GCTTGTTTAC CTAATTACCT GCCATTACGG GCATGGCATA TAATTCTCGA 
TGATATATAG TTCTTTTTTG GC

Gene models with high sequence identity

AT5G53140.1 [+] show detail - Protein phosphatase 2C family protein
E-value: 1e-113; Score: 407.00

InterPro Scan Digest

Program	Description	E-value
PatternScan	Protein phosphatase 2C, manganese/magnesium aspartate binding site	0
HMMPfam	Protein phosphatase 2C, N-terminal	2.7e-33
HMMPfam	Protein phosphatase 2C, N-terminal	1.3e-24
HMMPanther	PROTEIN PHOSPHATASE 2C EPSILON	1.1e-72
HMMPanther	Protein phosphatase 2C	1.1e-72
HMMPanther	PROTEIN PHOSPHATASE 2C EPSILON	2.8e-47
HMMPanther	Protein phosphatase 2C	2.8e-47
Gene3D	Protein phosphatase 2C-related	2e-38
Gene3D	Protein phosphatase 2C-related	2.1e-27
superfamily	Protein phosphatase 2C-related	8.5e-40
superfamily	Protein phosphatase 2C-related	1.8e-30
HMMSmart	Protein phosphatase 2C-related	1.8e-22

See the detailed result >

AT5G53140.1

Model type: Protein coding
Short Description: Protein phosphatase 2C family protein
Computational Description: Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR