K07534

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07534

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07534

Determination of introduced cDNA(s)

  • J013117O04 - Rice Full-length cDNAs - Original: J013117O04

    full reading [+] show sequence

    Nucleotide sequence: J013117O04 - full reading 
    GAAACAAAAA GAAAAAAGAA AAAAGAAAAG AAAAACGAAA CGAAAGCTTC 
    TTCTTCCTCC TCCCATGGAG TCGCTTGCGT CGCAAGCGAA GCCGGCGGCC 
    GTGCTCTGGC TCGCCGGCTT CCTCCAGGCC GCGCGCCTCC ACCGCGTCGT 
    CTCCTTCTGC GCCAGCTAGA GGCCTCTGTC GGCCAGGATC GCGCAGTGCT 
    TCCTGCTCAA CGGGTTCATC TTCCTGGGGA GCTTGTTAAC CCTAAAATCG 
    GTGGTCATTC CAATCCTTTC GTGGATACTG CCTGGGGATT GCAGTCAGTT 
    GCAAGGGCAG CATCTGTGTG ATCACACAGT AGCTGTAGCG ACCTATTCAT 
    TTCTACGCTC TGTTCTTATT CAAATATTCT ATGTATTATG GTTTTATCCA 
    CTTTACATCT TCAGCTTCGT GTTGAGTACA CTTTGGTATG GACTATTGTT 
    TTACCATCCT CAAGATTCCC GTATTTCATA TACTAAACAG TGGTGGGCCC 
    AATTGTACCT TTTGTAACAT TGGCCATCTC ACGTCAGGTA TAATGACATT 
    GCTAAGCATG CTTTGGATGT TGTGAAAAGA AAGAGCCTAG ATGCAACTAA 
    AGCATTGGAT GCTCACACCA TATCTGAATC AACAGAGAAA CCTGAAGGGT 
    TTGATGAGTA GGTTCACATG AAAACTCGTT GATTGCTTGT TGTTTTTACA 
    TGTTCTGCAT GTTGACATGC TATTGTTAGG GTTGCAATTG GTATTGGAGA 
    ACAGGTCTAT TCAATTCTTC TTTTAACTAT TTTCTTTATT GAGGTTTCAG 
    TAATTGGTTA CATACCTTAC TTTGGGAAGC CTATGAATTT CCTGCTATTA 
    TCTTTGATGT ATGCCTACTA CTGCTTCGAG TACAAGTGGA ACTTCTTTGC 
    AGTGAGCCTG AATGAGCGGC TTGATTTCTT TGAGTCAAAT TGGGCCTTTT 
    TTGCTGGATT CGGTATGTTG ATAATCATTC ATTGCATATG GTGCAAAATA 
    TATGCTTTTG CCTTCTTAGG CCATGATGCC CTGCCTGTTT CAGCTTTGGA 
    CTGTAATGCA AAGTGATTTT GCATTTTAAA GTTTTGATTT TTAAGAATAA 
    TTTTAGGTAG ATTTTTACTT GTATTCTTAG CAATCTCGAG AAGAGAACTG 
    GACAAAAGTC ACAAAGAGAA CTCCTAAAAT CCTTATGGTT ATGCAAATGT 
    AATTGTTGGA AAGTAATCTA AACTATAAAC CTTTTTGTTT CTTGTGCATA 
    TGTTCTTGGC AAGAAATACA TGCATCTCTA ATCGTCTTTA TGGAAAGTGT 
    TGGTACTTAT GGGATCTTAA TTCTCTCAAC TTGTGGTCAT CATGCTTGGC 
    AGTTAGCAGA TAAGTCATCT ATTGGAAGTA ATCCTGTACC AAGCTGAACG 
    TTGAGCATTT TCTTGTAATT TTCATGGACA AATATATCTC GGATAGGTTC 
    TCAGGCAGTC CTAGCTATTT GCGGCATGCA TGTTCCTTAT AAAGTTTGCA 
    GGATCCTATA TAACTGACAG TTGTTGATCT GTTTTGATGT ACCTTTATAA 
    ATGGCATATG TTACTATGTA ATTCTGTTTC TGTACATTCT TCGACTTACT 
    CCGTGTATGC TAGCATTTAT GTGATTGACA TGTTCTTTGA TACCATTTTT 
    ATATAGGTAG TCCATGTGTA CTTCCAATTT TCTTCTTCTC TCCTCTTACA 
    AGTTATGGTG TAATGGCAAT ACTTTATCCA CTGGTATGGA GAAACACTCA 
    CTAGCAGCAT TTTTTGTTTC CATTTAAACA GCATGCAGAC ATACTTGCTC 
    TTGTAAAATA GGCATAGAAG CTAGACATGG AAAATCCCTT AAAAGCACTA 
    ACTCATAATG CCATTCCCAA TTCTTATTTG GGCCAATTTG TTTGGTTCCA 
    TCACAAAAAA CACAAGAGTT GGAAAATACC GTCGCACGTG TCATTGACAG 
    GTGGGTCCAG ACACCACATG TCAATTGTCA TTCTTACATA TGATGTTAAA 
    TTTTAACTCA TTTATCTCTA CGATGGTATT TTTCCAAATT CTCTTATTAA 
    AAAGAACTCA ATCCGCAATT CTACATCCAG TCCTTTTCTC CACCGAAACT 
    GGTGTGGAAA CTGGATGAGA AAAAACAGTA TCTTCCTTTG TTCCCTTCCA 
    TCTAATAATA TTTCCCATCC AACATATTCT GAGTGCAGTT ATGCAATGTT 
    GTCTGTTGCA GTTTGTATTG ACTGCTGCAG GTACCCAAGC AGAAAAAGTA 
    ATTGATCAAC TGAAACCTTC GCATGGAGGG AAACTGCAGA GAATACCTGT 
    TTTCTTCATA GCTAAGCGAC TAACGACTCA AGTGCTGCAA TTGTTTCCAG 
    AGGTACACAA AGAACAATGA AAGGATCCAC ATAACCATAG CAAAGGAAAC 
    AAACGCTGTG CTGGGCTTTA TCACAGTGCT GCTGTTGAAG TTACACCCGA 
    AGGGTGTATA ACCAGAACTG TAAAACTGTA AATATTCCGC CATTGCGATT 
    GTATATATGG GGATAAAGGG AATTAAAAAA AAAAACTATA CTTGTGCG

    Gene models with high sequence identity

    1. AT4G06676.2 [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS Inter...
      E-value: 8e-64; Score: 242.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Etoposide-induced 2.4 5.40000000000002e-25
    HMMPanther Etoposide-induced 2.4 1.70000295590054e-29
    HMMPfam Etoposide-induced 2.4 3.5e-16

    See the detailed result >

    AT4G06676.2

    Model type
    Protein coding
    Computational Description
    FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Etoposide-induced 2.4 (InterPro:IPR009890); Has 261 Blast hits to 259 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 16; Plants - 81; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR