K07606

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07606

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07606

Determination of introduced cDNA(s)

J013127P19 - Rice Full-length cDNAs - Original: J013127P19

full reading [+] show sequence

GAGTGTGTTA GAACTGAACT GTGAGGAGCT TCAGAGACTA TGGAGCAAGG 
TGTAGCTGGA GAAAACGTGT ACAACACAGA GAGACTGCAC AGCTACGGAA 
GTGGTAAACA CCAGTGCTAG TATATGTATG GATTGAAGGT AACGTAGCAT 
TTGCCTTCAC CACAACTCTG CAAGTCACCA GCATGGCTAT CAAGCTTACA 
AAATATCAGT TCTTTTCTTC TCGTGCCACT GCACTGCACC TAAGGAGGAG 
AGAGCTGAAG TTGCTTCCAT TCCCATCTTT TCCCTGCAGC TCTAGTTCAG 
CTCCTAACAC TTGTTCACAG CAAAGTCATC TCCTGTTAGT TTCATCTGCA 
GGACCTAGAG AACAAACATT ACTTCCGGCT GATTCCCGTT CTTCTCTCCC 
TCATGGCATC ACTGATAACG GTACAAGAAA GGAAGGAAGG AGGAGGAGGA 
GGGGGAGAAA GAGGAAGGAG ACAGCAAAAG ATGAAGGGGA GTGTGTTCCA 
TCTGCGGAGG AAGTGTCCAT TAGGGTAAAT ACTCTTTATG AGAGTGGCGA 
CCCCATTGGG AAGAAGGAGT TGGGCCGGTG CGTGGTACAA TGGCTAAAGC 
AGGGTATGCA CTCAATGGCT ATAAAATATG CTTCCACAGA AATGCAGAAC 
GATGGAGCAA CATTCTTACT GGATGGTGGA TCATCTGAAG ACAACCTCGG 
ATTTGTGATG CTTGCACAGC CTTATCTATC AGCAATTCCC ATGCCCAAGG 
GACAGGAGGC GCTCTGCCTC AAGGCCTCTA CTCACTATCC TACCCTCTTT 
GACCACTTTC AAAGGGAACT CCGTGATGTT CTGTTGAAAC AACAGAACCA 
GGGTCTTATT TCTGATTGGC GCACCACTCA ATCTTGGATG CTTCTGAAAG 
AATTGGCTAA CTCAGCTCAG CATCGAGCAG CTGCCCGCAA ACCTAAAGCT 
CCTACTACGC ACAGTACTCT TGGCATAAGT CTTGATAAGA CAAGGTTGAT 
GCAGACCAAA ATTGAAGACT TTGTCAAGAA AATGTCAGAC CTTCTACATA 
TAGAACGAGA TGCGGAGCTG GAGTTTACAC AAGAAGAACT GAATGCCACC 
CCTGTGATGG ATGGGAACTC AAAGAAGCCA CTCAAACCAG TAGAGTACTT 
AGTCACTCAT GGGCAGTCAC AGCAAGAGCA GTGCGATACC ATTTGCAATT 
TGAATGTTAT CAGCAGTTCA ACTGGGTTGG ATGGCCAGCA TCTGGTCCTA 
TTTAGAGTGA AAGATAACCA TAGATTGCCT CCAACCACAC TCTCTCCTGG 
GGATATGGTT TGTATCAGGA CATGTGATAA CCGGGGGGAA ATTACCACAT 
CTTGCATGCA AGGCTTTATA TATAATCTTG GTGAGGATGG TTGCAGCATT 
ACCGTGACAC TGAAATCCCG CCGTGGTGAT CCTACGTTCT CCAAGCTTTT 
TGGGAAAAAT GTGCGGATTG ACAGGATTCA GGCATTGGCT GACGCACTTA 
CATATGAGCG AAATTGTGAA GCACTGATGC TTCTTCAAAG GAAAGGTTTA 
CAGAAAAAGA ATTCTTCCAT TGGAGTAGTA GCCACTCTGT TTGGGGACAA 
GGAAGACATG ATGATGATGG AGCAGAATAA TCTGGCTGAT TGGGGAGAAT 
CAACAATACA TGATGATGAG CTATTGAAAA AGAACAAATA TGACTTTGAT 
GCCTCCCAGT TAAAAGCTAT CACACTAGGC TTGAACAACA AAAGGCCTGT 
CCTAATAATC CAAGGACCTC CTGGCACGGG CAAGACTGGT TTGCTTAGTT 
ATCTCATTGC ATGTGCTGTC CGAAAGGGTG AACGCGTTCT CGTAACTGCT 
CCAAGCAATG CAGCAGTTGA TAACATGGTG GAGAAGTTGT CAGATACTGG 
ACTGGACACA GTACGAGTTG GAAATCCTGC TAGGATATCT CCATCTGTTG 
CTTCAAGGTC CTTGGGAGAG CTTGTGAACA GAAGACTTCA GAAGTTCACA 
GAAGAGTTCG AGAGGAAAAA ATCCGACTTG AGAAAGGACT TGAAGCATTG 
CATACAGGAT GATACATTAG CCGCAGGTAT ACGTCAACTG TTGAAGCAGC 
TTGGGAAGAA CTTT

Gene models with high sequence identity

AT5G35970.1 [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
E-value: 0; Score: 655.00

InterPro Scan Digest

Program	Description	E-value
superfamily	P-loop containing nucleoside triphosphate hyd	2.5e-14
HMMPfam	Domain of unknown function DUF699, exodeoxyribonuclease V alpha chain	2.7e-05
HMMPanther	DNA-BINDING PROTEIN SMUBP-2	1.1e-30
HMMPanther	DNA2/NAM7 HELICASE FAMILY	1.1e-30

See the detailed result >

AT5G35970.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 6377 Blast hits to 5712 proteins in 1082 species: Archae - 188; Bacteria - 2376; Metazoa - 1211; Fungi - 1055; Plants - 600; Viruses - 0; Other Eukaryotes - 947 (source: NCBI BLink).
Link: InterPro Scan - TAIR