K07609

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07609

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07609

Determination of introduced cDNA(s)

  • J033030J06 - Rice Full-length cDNAs - Original: J033030J06

    full reading [+] show sequence

    Nucleotide sequence: J033030J06 - full reading 
    GGGGCTGTGC AAGGAAGCCA AGAACCAACT ATGGCGGGCG ACGGGCTTCC 
    CCGGATCGCG GTGGTCGGCG CCGGCATCTT CGCGCGCACC CAGTACATCC 
    CAAGGCTCCG CGAGATCGCC CACCTCGTCC TCCTCAAGAC CATCTGGAGC 
    CGCACCAAGG AATCCGCGGA GGCCGCCGCG GAGCTCGCCC GGGACTTCGC 
    GCCCGAGATC CAGCCCAGAT GGGGCGACGC GGGCCTGGAG GAGATTATGG 
    GAGACGCTTC CATCTCCGCC GTCGCCGTCG TTCTTGCTGG CCAAGTGCAG 
    GTTGACCTCT CCTTAAAAAT GCTCAAGGCA GGAAAGCATG TGATACAAGA 
    GAAACCTGCT TCTGGATCAA CAATGGAAGC AGAAACAGCA TTGTCAGTTT 
    ACAATTCATT TCCAAACCAA TTCCCATACA AACCAATTTG GGCTCTGGCA 
    GAAAACTACA GATTTGAACC TGCATTTGTG GAGTCAAGGA AGTTGATGAG 
    TGATATTGGT GATATGATGA ACATCCAAGT TATTGTTGAA GGGTCAATGA 
    ATAGTTCAAA TCCATACTTT AATAGCTCCT GGAGAAGAAA TTTTGTGGGT 
    GGCTTTATAC TGGATATGGG TGTGCATTTC ATAGCAGGAC TAAGAATGAT 
    GGTTGGTTCA GAAATAGCAA CTGTATCGTC TATCTCCCGT CATGTGGATA 
    AGGCTTTACC ACCACCTGAT AACATATGTT CTCTTTTCCA GCTAGAAAAT 
    GGATGCGCTG GGGTCTTTGT GTTTGCAGTC AACTCGAGAA CACCCAAGAT 
    ATTATGGCGG GTGGATGGAA CTAGAGGAAC AGTGCAAATA GAACGTGGAA 
    TTGCTAGTGG GAAGCATGGG TACCAGGTTT TATTCACCAA TGAAAATGGG 
    CAGTGCCAGA CGACATTTTA TCCATTCTGT GGCGTGAATG AAGAACTGAA 
    GGCTTTTGTT CATGACATTG TGCAGGCAAA CAAAGATGGG GATCACAAGG 
    CTGAACCCCG CAGTTCTTAT GTTGAAGGCG CACGGGATGT CGCCGTTCTA 
    GAAGCCATGC TTGAATCTAG TGCGAAGCAA GGAACCATGG TCCAAGTGAA 
    GAAATTCTAA CATCCATAAA ATTGTTCAAA AAAAGAGAGG GAAATATATT 
    CTTCAGCAAG TTGGTACGCC AATTATGTAG CTTTACTAAT AAGGAACATT 
    TTTTCCAAGT TCATACATAC CATTGAGAGT ACAGCGTGCA AATAGCAGTG 
    TTTCCAGAGA ACCAACTTTC TTTGACTCCA TACATATTTG TTGGCTTGTT 
    GCCATTGATA AATTGATTAT TACACACCG

    Gene models with high sequence identity

    1. AT3G20790.1 [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
      E-value: 5e-120; Score: 428.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D NAD(P)-binding domain 1.4e-14
    superfamily NAD(P)-binding domain 9.9e-22
    HMMPanther OXIDOREDUCTASES 1.4e-25
    HMMPfam Oxidoreductase, N-terminal 6.8e-13
    HMMPfam Oxidoreductase, C-terminal 1.6e-05

    See the detailed result >

    AT3G20790.1

    Model type
    Protein coding
    Short Description
    NAD(P)-binding Rossmann-fold superfamily protein
    Computational Description
    NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); Has 7400 Blast hits to 7400 proteins in 1508 species: Archae - 172; Bacteria - 5330; Metazoa - 189; Fungi - 322; Plants - 48; Viruses - 0; Other Eukaryotes - 1339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR