K07714

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07714

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
rosette leaf (PO:0000014)
  • decreased width (PATO:0000599)
    (Rosette leaf::Shape::narrow)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07714

Determination of introduced cDNA(s)

  • J033098J24 - Rice Full-length cDNAs - Original: J033098J24

    full reading [+] show sequence

    Nucleotide sequence: J033098J24 - full reading
    GGTCGATTCC CCTTTCTCCC GCTCTTCCCC TTTCAAATCT CTCTCTAGCC 
    GCTCCTCTCT ATAAACCCTA GTACTCGGGG GGCACCGCGC GCTCCGTCCC
    CCAAATCCGA TCCATCCCGC GAGATCGCCC CGCGCCCTTC CCCCTCGATA
    ATGGCGACGG CGCCGCCGCG GGTATCCTGC GGCTCCCTTC TCCAGGAACT
    TCAGGTACTC TGGGGACAAA TTGGCCAGAA TGAAGCAGAA AGAGACAGGA
    TGATATTGCA GCTAGAGGAG GATTGCCTCA ATGTTTACAG AAAGAAAGTA
    GAGCAAACAA GAAAGCAAAA GGAGGACCTG ATTGAAGAAC TTTCTTTTGG
    TGAATTGGAT ATTGAGAAAA TCCTTTCTGC TCTTGGAGAG CGAGAATCTT
    TTTCTAGGGT AGAGAAACTT GGGGGTACAT TACTGGAACA ACTTGCGAAA
    GTAGAGCCTG TTCTGGAAGA TTTGAGACGG AGGAGGGATG AGCGAGTCGA
    GGAGTTTATG GTTGTACAGG CGCAGATAGT TCGGTTACAT GCAGAAATTT
    CAGGAACAAT TGAAAATGGG GATCCTGTAC CTCCTTTGGT GGATGAGACA
    AACCTATCCT TAAGGAGGCT AGAAGAGTTT AAGAGCCAGC TTAAGGAGCT
    CCAAACTGAA AAGAATCTCA GGCTGCAAAA GATTGATGTA CAGATCAATT
    GTATCCATGA AATCTGCAAC ATGATGTCTC TTGATCTCAA GAAAGAACTT
    TATGATGTTC ATCCCAGCTT CGTTGAGTTG GGAAGGACCA CATCGATGAG
    TATAAGCGAC AGCACACTTG AAAGGCTTGC AGGAAAAGTT CATTCGTTAA
    ATCAAGAAAA GAAACAGAGG CTTCGGAAGT TGCAAGATCT TGGCAGCACA
    CTTATTGAGT TATGGAACCT AATGGACACA CCAACTGCTG AACAGAAATG
    CTTTGACCAT GTTACTTCTT TGATTTCAGT CTCACCAAGC ACAAAAATGC
    CCCAAGGATG CCTTGCACGT GAACTTATTG AGAAGGTAGA GGTTGAGGTT
    AAGAGGCTGA ATTGTTTGAA AGCCAGCAAA ATGAAAGAGC TTGTATTAAA
    GAAAATGATT GAGCTTGAAG AGATCTACAA AAGTGTTCAC ATGGATATTG
    ACAGTGATTA CGAGAGGAGA ATTCTCAATG ATCTTATTGA TTCTGGTAAA
    GCAGATCTCT CAGATTTGCT TACAGGAATG GATGGTCGAA TTACAAAGGC
    AAGAGAGCAC GCTCTAAGCA GAAAGGAAAT TCTAGAGAAG GTTGAAAAAT
    GGACATTAGC ATCTGAAGAG GAGAGTTGGC TTGATGAATA TGAAAAGGAT
    CAGAATCGCT ATAATGCTGG TCGAGGAGCT CACAAAAATC TCAAGCACGC
    TGAAAAAGCA AGGATGCTGG TTAGCAAAAT TCCATCTCTG CTGGAGAATT
    TAACTGCTAA AATTAAAGCT TGGGAAAAGG AGAACGGTGT CCCATTTATG
    TATGATAAGA TAAGGCTGTT GGATAGTTTA GAAGAATACA CCTCAAGAAG
    ACAGCAGAAA GATGAGGAGA AACGGCGATC GCGGGAGCTC AAGAAACTGC
    AAGAACAGTA TGCAGCAGAA CAAGGTGCTA CGTTTGGAAC GAAGCCAAGC
    CCTGCGCGTC CACCTTCGGC TAGGAAGCCT CTTGGGCAGA GCTCGAACGC
    CAACATAATC AGTGGAACTC CTACCAGCCG CCGTGTCTGT ACCCCGATGG
    CACGCAAGGG AGGCTTGTCT TCTGGAAAAG TGAAAGAGAC TGGCAAGACA
    GCCTTTATAC CGGCAAACTA TGTGGCCCTT CCCAAGGATT GCTCAGACAA
    TTCTAACCTG TGAGGCTGTG AGAATGTCAA CACCAGTTAT AAGTAGGAGT
    CTTTTACTCG GGCTTCTGCC TTTTCATTTT GCTTGATCTA TTCGATTAGC
    ATCTTGCTAA ATAGTTGGTC CGTTATGTGA TCTGAACTTT TGATGCGAAA
    ACCTTTCTGA CGTGAAATGA CCCCATCTAT AGGATGATTC TGTACTGGAA
    GATTCCTGAT TTTAACTTGA CAGTGTCCAT TTAAATTATG TTGTCTTTCA
    GTCCAAAAAA AGTTGTCTTT ATGTAGTTTA CTTGACTCAC CTAAAGTAAA
    TTTCATCTCC CGATAGTTTC TTCGGTTGAT ACTGCAGTTA TCTGCAAAAT
    GGTTTTCTAA TTTGTTCTTA TACTTGTTTC TCAACAATTA TATATCAAAA
    TGGAGATTTC CTTGC

    Gene models with high sequence identity

    1. AT5G55230.1 [+] show detail - microtubule-associated proteins 65-1
      E-value: 5e-129; Score: 459.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    HMMPfam Microtubule-associated protein, MAP65/ASE1-type 3e-64
    HMMPanther Microtubule-associated protein, MAP65/ASE1-type 2.1e-101

    See the detailed result >

    AT5G55230.1

    Model type
    Protein coding
    Short Description
    microtubule-associated proteins 65-1
    Curator Summary
    Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution.
    Computational Description
    microtubule-associated proteins 65-1 (MAP65-1); FUNCTIONS IN: microtubule binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR