K07714

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07714

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
rosette leaf (PO:0000014)
  • decreased width (PATO:0000599)
    (Rosette leaf::Shape::narrow)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07714

Determination of introduced cDNA(s)

  • J033098J24 - Rice Full-length cDNAs - Original: J033098J24

    full reading [+] show sequence

    Nucleotide sequence: J033098J24 - full reading 
    GGTCGATTCC CCTTTCTCCC GCTCTTCCCC TTTCAAATCT CTCTCTAGCC 
    GCTCCTCTCT ATAAACCCTA GTACTCGGGG GGCACCGCGC GCTCCGTCCC 
    CCAAATCCGA TCCATCCCGC GAGATCGCCC CGCGCCCTTC CCCCTCGATA 
    ATGGCGACGG CGCCGCCGCG GGTATCCTGC GGCTCCCTTC TCCAGGAACT 
    TCAGGTACTC TGGGGACAAA TTGGCCAGAA TGAAGCAGAA AGAGACAGGA 
    TGATATTGCA GCTAGAGGAG GATTGCCTCA ATGTTTACAG AAAGAAAGTA 
    GAGCAAACAA GAAAGCAAAA GGAGGACCTG ATTGAAGAAC TTTCTTTTGG 
    TGAATTGGAT ATTGAGAAAA TCCTTTCTGC TCTTGGAGAG CGAGAATCTT 
    TTTCTAGGGT AGAGAAACTT GGGGGTACAT TACTGGAACA ACTTGCGAAA 
    GTAGAGCCTG TTCTGGAAGA TTTGAGACGG AGGAGGGATG AGCGAGTCGA 
    GGAGTTTATG GTTGTACAGG CGCAGATAGT TCGGTTACAT GCAGAAATTT 
    CAGGAACAAT TGAAAATGGG GATCCTGTAC CTCCTTTGGT GGATGAGACA 
    AACCTATCCT TAAGGAGGCT AGAAGAGTTT AAGAGCCAGC TTAAGGAGCT 
    CCAAACTGAA AAGAATCTCA GGCTGCAAAA GATTGATGTA CAGATCAATT 
    GTATCCATGA AATCTGCAAC ATGATGTCTC TTGATCTCAA GAAAGAACTT 
    TATGATGTTC ATCCCAGCTT CGTTGAGTTG GGAAGGACCA CATCGATGAG 
    TATAAGCGAC AGCACACTTG AAAGGCTTGC AGGAAAAGTT CATTCGTTAA 
    ATCAAGAAAA GAAACAGAGG CTTCGGAAGT TGCAAGATCT TGGCAGCACA 
    CTTATTGAGT TATGGAACCT AATGGACACA CCAACTGCTG AACAGAAATG 
    CTTTGACCAT GTTACTTCTT TGATTTCAGT CTCACCAAGC ACAAAAATGC 
    CCCAAGGATG CCTTGCACGT GAACTTATTG AGAAGGTAGA GGTTGAGGTT 
    AAGAGGCTGA ATTGTTTGAA AGCCAGCAAA ATGAAAGAGC TTGTATTAAA 
    GAAAATGATT GAGCTTGAAG AGATCTACAA AAGTGTTCAC ATGGATATTG 
    ACAGTGATTA CGAGAGGAGA ATTCTCAATG ATCTTATTGA TTCTGGTAAA 
    GCAGATCTCT CAGATTTGCT TACAGGAATG GATGGTCGAA TTACAAAGGC 
    AAGAGAGCAC GCTCTAAGCA GAAAGGAAAT TCTAGAGAAG GTTGAAAAAT 
    GGACATTAGC ATCTGAAGAG GAGAGTTGGC TTGATGAATA TGAAAAGGAT 
    CAGAATCGCT ATAATGCTGG TCGAGGAGCT CACAAAAATC TCAAGCACGC 
    TGAAAAAGCA AGGATGCTGG TTAGCAAAAT TCCATCTCTG CTGGAGAATT 
    TAACTGCTAA AATTAAAGCT TGGGAAAAGG AGAACGGTGT CCCATTTATG 
    TATGATAAGA TAAGGCTGTT GGATAGTTTA GAAGAATACA CCTCAAGAAG 
    ACAGCAGAAA GATGAGGAGA AACGGCGATC GCGGGAGCTC AAGAAACTGC 
    AAGAACAGTA TGCAGCAGAA CAAGGTGCTA CGTTTGGAAC GAAGCCAAGC 
    CCTGCGCGTC CACCTTCGGC TAGGAAGCCT CTTGGGCAGA GCTCGAACGC 
    CAACATAATC AGTGGAACTC CTACCAGCCG CCGTGTCTGT ACCCCGATGG 
    CACGCAAGGG AGGCTTGTCT TCTGGAAAAG TGAAAGAGAC TGGCAAGACA 
    GCCTTTATAC CGGCAAACTA TGTGGCCCTT CCCAAGGATT GCTCAGACAA 
    TTCTAACCTG TGAGGCTGTG AGAATGTCAA CACCAGTTAT AAGTAGGAGT 
    CTTTTACTCG GGCTTCTGCC TTTTCATTTT GCTTGATCTA TTCGATTAGC 
    ATCTTGCTAA ATAGTTGGTC CGTTATGTGA TCTGAACTTT TGATGCGAAA 
    ACCTTTCTGA CGTGAAATGA CCCCATCTAT AGGATGATTC TGTACTGGAA 
    GATTCCTGAT TTTAACTTGA CAGTGTCCAT TTAAATTATG TTGTCTTTCA 
    GTCCAAAAAA AGTTGTCTTT ATGTAGTTTA CTTGACTCAC CTAAAGTAAA 
    TTTCATCTCC CGATAGTTTC TTCGGTTGAT ACTGCAGTTA TCTGCAAAAT 
    GGTTTTCTAA TTTGTTCTTA TACTTGTTTC TCAACAATTA TATATCAAAA 
    TGGAGATTTC CTTGC

    Gene models with high sequence identity

    1. AT5G55230.1 [+] show detail - microtubule-associated proteins 65-1
      E-value: 5e-129; Score: 459.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    HMMPfam Microtubule-associated protein, MAP65/ASE1-type 3e-64
    HMMPanther Microtubule-associated protein, MAP65/ASE1-type 2.1e-101

    See the detailed result >

    AT5G55230.1

    Model type
    Protein coding
    Short Description
    microtubule-associated proteins 65-1
    Curator Summary
    Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution.
    Computational Description
    microtubule-associated proteins 65-1 (MAP65-1); FUNCTIONS IN: microtubule binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR