K07737

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07737

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07737

Determination of introduced cDNA(s)

  • J013000E14 - Rice Full-length cDNAs - Original: J013000E14

    full reading [+] show sequence

    Nucleotide sequence: J013000E14 - full reading 
    TCCCACCCGC TGCTGCTTCC TCGCCTTTCC GATAAGAAGC TTCGCCGTCT 
    CCTCCTCCTC TTTCCCTTCC TCCGCCGCTC CATCAAAAAA TCTCCACAAG 
    GCTTAAGCAG AGGGAGGGTG AGGGATTAGA AACAAACAAC CCTTCGGAGA 
    AAATCACGAG AGGCTTCCCG AGGGCAAAGT CTCCGATTCA TTCAGGTCCG 
    ACTCGATCGG CGATCCGACG AAGCTCGAGC AGGTGAGGGA GACGGACTCG 
    GACTCGGAGC ACGGAACCGG TATATTAGGG AGGCTGAAGA GGGAGCTTGA 
    GAGGGGGTCT AGCCTTAAGC TCGAACGCGG GGTGGTGGTT GTACCAGCAG 
    CAGCAGGGAA TCATGGACTC GGAGCACTGG ATCTCGAGCC TCGCCGCCGC 
    CAAGCGGTTC TACGCGGCGC AGCTCGGTCA CGTCGACGAT ATGGCGGGGA 
    TTGGAATGGA GGAGGTGGAG ATGGAGATGG AGGATGATGG CGAGGGCATG 
    GAGCTGGAGC TGGAGATGCA GCTGGAGGAG GCGACGTGGC CGGACGTGGC 
    CTGCCCCTAC TGCTACGAGG ACCACGACAT CGCGTCCCTC TGCGCCCACC 
    TCGAGGAGGA CCACCCCTAC GAGCCCCACA CCTCGGTGAG CTCCTCGCCG 
    CCATGCCCTG CGCCGCAGGG CTCCTTGCTC TGACGCTCTG ATGACATGAC 
    GCACAAAGTC TGGCAAAGCT GCTCCTTTTG TTCGATTAGT AGGAACGCTG 
    TAGCTTTAGG GGTTGACTTG GCGAATGAAC TCAATATTTG GGCTACTTGT 
    GGAGTTGCGG TAGTAGCAAA CTTGCGGGGT ATCTTCTTGA AATAGCCAAA 
    ATTCTTGAGA TGATAGTATT ATGCAAAGCT CCTCTAGCCT TGAGTTCTTG 
    CCTCTCTATG GCTTGGCTTG CAATAGTTTG TGAGCAAAGA GGTAGAATCT 
    TTGGTATCTG TATAGTATCA GTCAACTACG GAGCATAAGC TTATGGATTC 
    AGAACTTGGC TGAAAACACT AGCGATTTGG ACCGGGAAAT TGTGATTTTG 
    TGATTCGTAG GTAGGGAAGT TGTGTTGTAG TTTTAAGGGC AAGGATAATT 
    ATATATTTCT TATAAGAACT GTAGATTATG CTTGACTGAA GGTTTTAAAT 
    CAGTAGCCAG CATTGTTCAC TTCTGTAGTT GACTGCTCTA GCTTGTAGTT 
    GTGTGTTCTA TTTCAAGGCC TACTTCTGTA AACAAGGTAG CTAATTTCCT 
    TTTTATTTGA TTGCCACTAT AGTACTTATG TCACTGCGCC GACTGTGCAC 
    CCTACTCTTG GTGGACAGCT GCTCAGTTGT CATAAACTAA ATGTTCATGA 
    ATACCATGAC TTAAAAACGT AATCCTCTGT TATTCATCTA ACTTCAGCAA 
    CAGGAGTTGA TTTTGCAATG GCACAAAATA ACCTAGAAAA GTTAATGATG 
    GTAATGTGAT TTAGATTTAA AAGACTCGAA CTGTTGTGTG GGGTCCATTT 
    TTAAGATTTG GATTCATTTT ATTCTAGTGA AACAGAGGTG TTTGAGAATG 
    CCATATATAT ACTTTTAATG TTATAATCTC GTCTGAAGTT CGAGATGTTA 
    ACTGCAGAAA TCCTAGAATC TGAAATAACC ATTGTGCTTA TTTGAATCTT 
    TCGCTAAGTT TAGTATCAAA TAAGCACATT GGGTTCAAAG TATATTAAAT 
    CAGCACCTTA TGTTCATATA TTGTGCACAT AAAATGTGCA TTGTGTTCTT 
    CTCCTGATTT ATTTGCTTTG CTTTGCTTTC AGCCCTGTCC CATCTGCTTC 
    GAAAAGATTA CAAGAGATAT GTTAAATCAT ATCACCATGC AACATGGTTA 
    CTTGTTCAAG AGTGGTCGCA GGATGCGCAG ATTCGATATT CCCGAGAGCC 
    AGGCACTTTC TTTACTGAGC CGAGATCTGC GGGATGCTCA GTTACAGGCA 
    CTTCTAGGAG GTGGTCATCG TCAGCGAAGA AGCAACACTA CTGCCACAAA 
    CATTTCTGCT GATCCTCTGC TTTCTTCGTT TGGCCTGGGC TTCTCAACAT 
    TGGATTCAGA GGAACGATCA AAAGCACCAG TTCCTATTCC TGATGATACA 
    TCAATTCATA AGGATACTCC TGCTCAGCCA TGGGAATCAA GGATCGACTC 
    ATCGCTCACG AGTGAGGAAA GGGAACAAAA GCGGAAACAA GCCACTGACA 
    GAGCAACCTT TGTGCAAGGC CTGGTGCTCT CCACTTTATT TGAAGACTGA 
    CTGTTCAAGT AGCCCTAGTT TTTCTTGCTA GATGCATGTT TCCTCTCGCT 
    GGTTCCCATA AAAGCGCAAT GTTCCACCTG ATTTGGTGAA TCTGATTTCG 
    TCAACAGTGA GATGGATGTG CTTCTGGTGC CCCGTTGTTC TTTCGCTTCA 
    GTAAAGCGCG AAGTTGATTT GGGCATGATA CACACCTTAA TTTATGTCAG 
    CTGCCCTGTA CCATTGCTTT TTATGAATTA ACGGGTAGCC ACACCTTGAC 
    TGTAACTCGT TGTTGTACCT CTCCATACTG TCTAGGAACA TTGGTTTGTA 
    CAAACATAAA AGCTGTTACA TGTTGTACAA TGCAAAGGCA AATGCAGAAG 
    CACCGTTTAT ATCGAATC

    Gene models with high sequence identity

    1. AT3G06760.1 [+] show detail - Drought-responsive family protein
      E-value: 2e-13; Score: 75.50

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Drought induced 19/ RING finger protein 114 8.5e-41
    HMMPfam Drought induced 19/ RING finger protein 114 1.7e-12

    See the detailed result >

    AT3G06760.1

    Model type
    Protein coding
    Short Description
    Drought-responsive family protein
    Computational Description
    Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G49230.1); Has 246 Blast hits to 246 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR