K07919

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07919

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07919

Determination of introduced cDNA(s)

J033075F07 - Rice Full-length cDNAs - Original: J033075F07

full reading [+] show sequence

GGTCTTCTCC TCCTCCTCCG CTTCGCCTCC TCGCGCAGAT CCCGACGCAC 
ACCTCGCGCC CGCGCCGCCT ATAAATTCCC CCGCCTCGCC GTTGCCGCCG 
CCGCGGGAAG CGAGGCGAAG CGAGGGAGCG CGTCTAGATC CGCACCGGCG 
AAACGACCCA AGCTGCCTTT CCCGTCGCCG CACGCATCAT CCGGGCTCTG 
TTGCTGCTGC TATACCGCGC CCGTTCGCTG TAGCAGCAGG AGGAGGAGGA 
GGAGGAGCGG AGTGGTGGCG ATGGCGGCGA GGAAGAATGC CGGTGTCCTC 
GCGCTCTTCG ACGTCGACGG CACCCTCACC GCGCCCCGCA AGGTGGTGAC 
GCCGGAGATG CTCCAGTTCA TGAAGCAGCT GCGCGAGCAT GTCACTGTGG 
GCGTGGTTGG GGGATCTGAT CTGGTGAAGA TTTCCGAACA ACTCGGCAAA 
TCAGTTACTA CTGATTACGA TTACTGCTTC TCTGAAAATG GCCTGGTCGC 
GCACAAGAAC GGCGAACTCA TTGGAACTCA AGTAAGTCCT TAGGCAAATA 
TATGCATTAT ATAGTGTCTG AAATTTCACT TGGAGATCAT CAAATTCCTG 
GCTGGGGCCT GGGAATAATG GTAGAGGTTC TTCTTTTCAT TTGGCCAATT 
TCTAAATGAC ATAGTGTTGC CATACCCGCC CCCCCCCCCC CCCCAAAAAA 
AAAAAGTCAT TGGCTGCTAC TGGTCTTAGA ACGACGCCTT TCTATATTAT 
GGAACATTAT GGAACATAAT GTTTTGTGCT CTGCAGAGTT TGAAATCGTT 
TCTTGGAGAT GATCAGCTAA AGGAATTTAT TAACTTCACG CTTCATTACA 
TTGCTGACTT GGACATCCCA ATCAAAAGGG GTACATTCAT AGAGTTCCGA 
AGTGGAATGC TGAATGTGTC GCCCATAGGG AGAAATTGTA GTCAAGAAGA 
ACGTGATGAG TTTGAAAAGT ATGATAAGGT ACATAACATT CGGCCTAAAA 
TGGTCTCAGT GCTTCGTGAA AAGTTCGCCC ACTTGAACTT GACATTTTCT 
ATTGGAGGGC AGATTAGTTT TGATGTGTTC CCACAAGGCT GGGACAAAAC 
TTACTGCTTG AGATATCTTG AGGAATTTCA AGAAATCCAT TTCTTTGGGG 
ACAAAACCTA CAAGGGAGGC AATGATTATG AGATATTTGA GTCTGACCGG 
ACAATTGGAC ATACAGGTGT GCTGTTTGTT TCATAAAAGC TATTATTCTC 
ATGACATTAC TGTATATGCG TTGGACTTGA ACTTCTTGTT ATAACTTAAA 
ACTTGTGTAT AAGATAGGAT TAGGTTTATT GGACACAAAA ATTTTATAAT 
GTTACTGTGA GACATTCTAT AACCATCAGC ACACAGTCGT AGATCAGACT 
GTGAAACTTG GGTATTGACC CAACCAGACA GGCTATTCCA ATCAAGCAAT 
ACTGCACAGA TCATGCAAAT GAATGTTCAG TAGCAGTATA CTTGCTGGCA 
GTTTCCATCA TTAGAATTGA CCAATTCAGG TTAATGTTCA TGAATAAAAT 
TCAGTTTGAA ACAACCACAA ACACTTGGGT CAAGTCTTGA ATAAACAAAG 
CAATAACATT TTCTTCTGGA AATACTTCAC AAGTTCCATT ATGGTTGAGC 
TGTATCCTCT TACTAAATAG GAATACTCTT GCAAGCTTCT CATATGTGGC 
TGAGTCTTGT TTGCCGAGGT TAAACTTGCT TTAAATCTTT TCTGAGCTAA 
TACATGATTG ATGCCATCAC CAAGCTGATT TCATCATTTA TATTTGCAGT 
TACCAGTCCT GATGATACAG CAGAGCAGTG CAGATCTCTC TTCATGTCGA 
AGTGACCTGA TTACCGTGCA TTTTATTTAT TTTACATAGC ATTCCTCACA 
TTTCCTGTAT TTCCCTTTTT TTTATACCAT ACAAGTGCTG CTTCTTACAG 
AATGTACTTC TCCGTATTCA CAAGTTTCAG ATTATATGTG TACACTTTGG 
TTCAAATAAA TGAGAGCTGG CATTGTTT

Gene models with high sequence identity

AT2G45790.1 [+] show detail - phosphomannomutase
E-value: 5e-72; Score: 269.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Eukaryotic phosphomannomutase	9.3e-17
HMMPfam	Eukaryotic phosphomannomutase	8.8e-79
superfamily	HAD-like	6.8e-11
superfamily	HAD-like	6.1e-11
HMMPanther	Eukaryotic phosphomannomutase	3.7e-39
HMMPanther	Eukaryotic phosphomannomutase	1.3e-98

See the detailed result >

AT2G45790.1

Model type: Protein coding
Short Description: phosphomannomutase
Curator Summary: encodes a phosphomannomutase, involved in ascorbate biosynthesis
Computational Description: phosphomannomutase (PMM); FUNCTIONS IN: protein binding, phosphomannomutase activity; INVOLVED IN: L-ascorbic acid biosynthetic process, response to salt stress, mannose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic phosphomannomutase (InterPro:IPR005002), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379); Has 1083 Blast hits to 1081 proteins in 282 species: Archae - 1; Bacteria - 92; Metazoa - 201; Fungi - 171; Plants - 223; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink).
Link: InterPro Scan - TAIR