K08028

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08028

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K08028

Determination of introduced cDNA(s)

J013148N01 - Rice Full-length cDNAs - Original: J013148N01

full reading [+] show sequence

GATACACTTC ACTCGGTAGT ATACTCCAAG CTAAGCTTAG CACAAACATG 
GCGAAACTCA TCTTCCTCCT CGCAATGGTG GCATTTGCAT CCACCCTCCT 
CGTATCCATC GCCGGCGCAG CCGACAACTC GACCTCGCCG TCGTCGCCGT 
CGGCCGACCC GACGGCGTAC GACATGCTGC AGAGGTTCGG GTTCCCCGTC 
GGCATCCTCC CGCAGGGCGT GCAGGGGTAC AAGCTCGGCG ACGACGGGTC 
CTCCTTCGAG GTGTACCTCG CCGGCGACTG CGAGTTCCGG GCGGCGAAGA 
AGTACGTGCT CCACTACAGC AGCCGCGTCG CCGGCCAGAT CGCCACCGGC 
TCCATCACCT CCCTGGAGGG GGTGAAGGTG AAGGAGGCGT TCGCGTGGTT 
CCGCATCTCG GAGGTCGACG TCGACGGCGA CCAGATCAAG CTCCACGTCG 
GCCTCTACAC CGCCACCGTC GCCGCCGACC AGCTCGCCGT CAGCCCCCAG 
TGCAACTGAC GGCCGCCGGC GATCGATTGA TTCATCATTT CTCTTAATTA 
ATTTGTTGCA GTGTTGTTTA TTTGATGTGT TCAAGTAAGA GTAATCAATT 
ACGTCATTTT GTTACTGTCA CGGGAGGTAC TGCGAGGTAC CAACGAGATT 
AATTCACGAT ACATACGTCG TGGTACCTCC TTAGGAATTG TCAGAAGAAG 
ATTGTAATGG GTTATGTTGA GAGCTGCGAT AATTTGAGAG AGACGATGGA 
AATGGGTGGT GATGTTTTAT AAGAACTTTA ATACATGGGG AGAGAAAATT 
TTGTGTGC

Gene models with high sequence identity

AT4G02370.1 [+] show detail - Protein of unknown function, DUF538
E-value: 6e-20; Score: 94.70

InterPro Scan Digest

Program	Description	E-value
Gene3D	Protein of unknown function DUF538	2.7e-33
HMMPfam	Protein of unknown function DUF538	1.6e-30

See the detailed result >

AT4G02370.1

Model type: Protein coding
Short Description: Protein of unknown function, DUF538
Computational Description: Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G02816.1); Has 618 Blast hits to 617 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 617; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR