K08402

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) present in fewer numbers in organism (PATO:0001997) (Rosette leaf::Number::few)
	fruit (PO:0009001)	decreased length (PATO:0000574) (Silique::Shape::short)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin) abnormal (PATO:0000460) (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K08402

Determination of introduced cDNA(s)

J013033A11 - Rice Full-length cDNAs - Original: J013033A11

full reading [+] show sequence

GACGGAGCTC GAGCAACAAC CACCCACGCA CATCAAGGAG TCATCTCACC 
ACTCAACGAC AGCCTCGCAC AAGAGCAGGG AGGAATTTTC GGTTGTTCCT 
CGTCCCAAGG ATCAATAGAT GGAGAAGGCA GCGTGCAACG AGCATGTGAT 
CGGGATCCCA GTGAGCAACA GGGCTTTCGG CATCGAGGAG CCGGATTTCC 
CAAGCGAAGG AGCAGCCGCC TACCACGCCG AGGCGAAAAG CTCTGCAACC 
GCGCGTACGA GCTCCAGATT TGGCAGGACA GGGGACAGGC TCGCTCAAGG 
CATCAAAGAA CATGTGACTC TAGGACCAAA ACTGTACGAG ACCATGAAAG 
GCAAGCTGAC GCTGGGCGCG AGAATCCTCC AGGCAGGCGG CGTGGAGAAG 
GTCTTCCGCC GGTGGTTCGC CGTCGGCAAG GGCGAGAAGC TCCTGAGGGC 
CTCCCAGTGC TACCTGTCCA CCACGGCCGG CCCGATCGCC GGCATGCTCT 
TCATATCGAC GGAGAGGATC GCGTTCCGGA GCGACCGGTC GCTGGCGCTG 
ACCACCCCGA GCGGCGACAC GGTGCGTGTG CCGTACAAGG TGGCCATCCC 
TCTGAGGAGG GTGAAGACGG CCAAGCCGAG CGAGAACAAG CACCGGCCGG 
AGCAGAAGTA CGTCCAGGTG GTGACCGACG ACGGCTTCGA GTTCTGGTTC 
ATGGGATTCG TCAGCTTCCA GGTGACCCTG AAGAACCTGG AGCTGGCCGT 
CGCGCAGGCG CAGTGATCGA TCGATCTCTG ATGAAACAAA CGTCGAAGTT 
GGGTCGTCGG TTTCTTGGTC GTGTGCCTTG TGTGTGGTCT GGTTAATCTG 
TTGTGCATAT GTGGTAGCGT CGTAGGTGTT TGTGGTGGAT TGCTTGGCGT 
TTTTGGCTTT GGAGCAAGTC CGGTACACAT GGTAGGAGAA ATTTTAGTGC 
ATCAAATTTC TTGATTGGTG TTGGAGAAAA TAGTGCCACG GCAAAAGTGC 
CATCATATAC ATGTGGTATG TACAAGATCA ATGAGAAATC CAAAAATGTT 
TGTTCAACAC TACATACTAC AGC

Gene models with high sequence identity

AT5G08350.1 [+] show detail - GRAM domain-containing protein / ABA-responsive protein-related
E-value: 1e-45; Score: 181.00

InterPro Scan Digest

Program	Description	E-value
HMMSmart	GRAM	2.3e-10
HMMPfam	GRAM	4e-12

See the detailed result >

AT5G08350.1

Model type: Protein coding
Short Description: GRAM domain-containing protein / ABA-responsive protein-related
Computational Description: GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23370.1); Has 358 Blast hits to 358 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR