K08412

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08412

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • present in fewer numbers in organism (PATO:0001997)
    (Rosette leaf::Number::few)
stem (PO:0009047)
  • present in fewer numbers in organism (PATO:0001997)
    (Stem::Number::few)
stem internode (PO:0020142)
  • increased length (PATO:0000573)
    (Stem::Shape::long internode)

Invisible phenotypes

Original: K08412

Determination of introduced cDNA(s)

  • J013075K17 - Rice Full-length cDNAs - Original: J013075K17

    full reading [+] show sequence

    Nucleotide sequence: J013075K17 - full reading
    CATATCGATG CTGCAGATTA CATGATGTCT ATATGTGGTG GTGATAGTCT 
    AAAGGAGCTT TCTTCACCTG GGAAAAGTGG CAGCATTTTC TATCTTTCTC
    AAGATGAACG TTTTGTTATA AAAACATTGA GGAAAACTGA GCTGAAGATT
    GGTTTGATGT AATACGTGCT GCAGATACTA TTGAAGATGC TTCCAAAGTA
    TTACAATCAT GTCAAAGCTT ATGATAATAC GCTCATTACA AAATTCTTTG
    GCGTGCACAG GATTACTCTG AAACCTGGAA GAAAGGTCCG TTTTGTTGTC
    ATGGGAAATA TGTTTTGTAC TGAACTGCGA ATTCATCGTA AGTATGACTT
    AAAGGGCTCT ACACAAGGCC GATCAACAAA GAAGCAAAAT ATAAATGAGA
    ACACAACACT AAAGGACCTT GACCTATCAT ATGTTTTTCA CGTGGATAAA
    CCATGGAGGG AGGCACTTTT CAGGCAAATT GCTACTTTCT TGCTCCTCTT
    TTTTTCTGAA CATCTTACTG TCGTCTTTCA TGGTTTTGTC TATATTGGCT
    TGAAGTCCAG GTTCCATAAC TTACCGTTTA TGATGTTACT TCTGGAGATT
    GTGTTCACTG GGTAGTCCCT TCTGGAAAAT TAAAAAGAAC AGTAGATTTA
    AATGACTTGT GCAGATTCCT GCTTCAGTCC CATGATTGGT GGACATCAAA
    ATTATTTTCT ACTATTTTGA TATTGATTCT TATCCTATTC TTGAGATCTG
    AAGAATACTT AAGATGGACA ATTTTTATTT ATACTATAGC AATAAATAGA
    TTTTTTTAAA TATAAACAAC TAGATTAAAG AGGCAAACCA GATTTTAAGC
    AGTGTCCGAC CATGCATACA AGAGATTGAA TTCCAGCTGT CTAGTTCAGT
    TTTGCATATT ACTGCTCCAT TTCTGCTGTG CTATTTTTCT TAACATGGTT
    GACGATGATA TCTTGAGAGC CAACAGTTGT ACTATTTTCA GGCAGATAGC
    TCTTGATTGT ATGTTCCTGG AATCCCAATC TATAATTGAC TATAGCATGC
    TATTGGGAAT CCATTTCCGA GCTCCCAATC ACCTGAAGCG TATCACATCA
    TGTCAGAACG CTCTTGAAAG TACTGGAATT TCAGCTGAAA CGGAATGTAG
    TGTTGCACTG CATCATGAGG AGACAATTTC TTCAAAGGGA TTTCTACTAG
    TTGCTGCTGA TGAGCCAGGT CCAGCAGTAC GTGGTTCGCA CATAAGAGGA
    AGCATGGTTA GGGCAGCAGA AGGTGGTTAT GAAGAAGTTG ATCTTGTTTT
    GCCAGGCACT GGAAGGTTCC GTGTTCAGCT AGGGGTGAAT ATGCCAGCTC
    GAGCTCGGAA AGTGCAAGAG GACGTGAACG TAGAAGTAGA AAACAGGGAC
    ACCATTGAAG AGTATGATGT TGTCCTATAC CTTGGTATCA TCGACATACT
    ACAAGAGTAT AATGTGTCCA AAAGAGTTGA GCATGCTGTC AAATCACTAA
    AATTCGACCC TCTTTCGATA TCAGCTGTTG ATCCAAATTT GTATTCGAGA
    CGATTTATAA GTTTCTTGGA GAAGGTTTTC CCCGAGCAAG ATTGAACAGT
    AAATAGATAT TGCAAGTTTC TTGG

    Gene models with high sequence identity

    1. AT1G10900.1 [+] show detail - Phosphatidylinositol-4-phosphate 5-kinase family protein
      E-value: 3e-62; Score: 236.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMSmart Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup 4.5e-09
    HMMSmart Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup 4.3e-09
    HMMPanther PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1.6e-22
    HMMPanther Phosphatidylinositol-4-phosphate 5-kinase, core 1.6e-22
    HMMPanther PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 2.8e-57
    HMMPanther Phosphatidylinositol-4-phosphate 5-kinase, core 2.8e-57
    HMMPanther PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1.4e-50
    HMMPanther Phosphatidylinositol-4-phosphate 5-kinase, core 1.4e-50
    superfamily SAICAR synthase-like 2.4e-13
    superfamily SAICAR synthase-like 2.8e-32
    superfamily SAICAR synthase-like 4.9e-33
    Gene3D no description 1.3e-09
    Gene3D no description 1.4e-11
    Gene3D no description 4.1e-10
    Gene3D no description 1.4e-28
    ProfileScan Phosphatidylinositol-4-phosphate 5-kinase, core 17.218
    ProfileScan Phosphatidylinositol-4-phosphate 5-kinase, core 22.46
    ProfileScan Phosphatidylinositol-4-phosphate 5-kinase, core 21.334
    HMMPfam Phosphatidylinositol-4-phosphate 5-kinase, core 2.7e-12
    HMMPfam Phosphatidylinositol-4-phosphate 5-kinase, core 9.3e-34
    HMMPfam Phosphatidylinositol-4-phosphate 5-kinase, core 1.8e-32

    See the detailed result >

    AT1G10900.1

    Model type
    Protein coding
    Short Description
    Phosphatidylinositol-4-phosphate 5-kinase family protein
    Computational Description
    Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1); Has 26222 Blast hits to 7747 proteins in 608 species: Archae - 0; Bacteria - 3917; Metazoa - 3982; Fungi - 423; Plants - 1715; Viruses - 0; Other Eukaryotes - 16185 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR