K08412

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08412

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • present in fewer numbers in organism (PATO:0001997)
    (Rosette leaf::Number::few)
stem (PO:0009047)
  • present in fewer numbers in organism (PATO:0001997)
    (Stem::Number::few)
stem internode (PO:0020142)
  • increased length (PATO:0000573)
    (Stem::Shape::long internode)

Invisible phenotypes

Original: K08412

Determination of introduced cDNA(s)

  • J013075K17 - Rice Full-length cDNAs - Original: J013075K17

    full reading [+] show sequence

    Nucleotide sequence: J013075K17 - full reading 
    CATATCGATG CTGCAGATTA CATGATGTCT ATATGTGGTG GTGATAGTCT 
    AAAGGAGCTT TCTTCACCTG GGAAAAGTGG CAGCATTTTC TATCTTTCTC 
    AAGATGAACG TTTTGTTATA AAAACATTGA GGAAAACTGA GCTGAAGATT 
    GGTTTGATGT AATACGTGCT GCAGATACTA TTGAAGATGC TTCCAAAGTA 
    TTACAATCAT GTCAAAGCTT ATGATAATAC GCTCATTACA AAATTCTTTG 
    GCGTGCACAG GATTACTCTG AAACCTGGAA GAAAGGTCCG TTTTGTTGTC 
    ATGGGAAATA TGTTTTGTAC TGAACTGCGA ATTCATCGTA AGTATGACTT 
    AAAGGGCTCT ACACAAGGCC GATCAACAAA GAAGCAAAAT ATAAATGAGA 
    ACACAACACT AAAGGACCTT GACCTATCAT ATGTTTTTCA CGTGGATAAA 
    CCATGGAGGG AGGCACTTTT CAGGCAAATT GCTACTTTCT TGCTCCTCTT 
    TTTTTCTGAA CATCTTACTG TCGTCTTTCA TGGTTTTGTC TATATTGGCT 
    TGAAGTCCAG GTTCCATAAC TTACCGTTTA TGATGTTACT TCTGGAGATT 
    GTGTTCACTG GGTAGTCCCT TCTGGAAAAT TAAAAAGAAC AGTAGATTTA 
    AATGACTTGT GCAGATTCCT GCTTCAGTCC CATGATTGGT GGACATCAAA 
    ATTATTTTCT ACTATTTTGA TATTGATTCT TATCCTATTC TTGAGATCTG 
    AAGAATACTT AAGATGGACA ATTTTTATTT ATACTATAGC AATAAATAGA 
    TTTTTTTAAA TATAAACAAC TAGATTAAAG AGGCAAACCA GATTTTAAGC 
    AGTGTCCGAC CATGCATACA AGAGATTGAA TTCCAGCTGT CTAGTTCAGT 
    TTTGCATATT ACTGCTCCAT TTCTGCTGTG CTATTTTTCT TAACATGGTT 
    GACGATGATA TCTTGAGAGC CAACAGTTGT ACTATTTTCA GGCAGATAGC 
    TCTTGATTGT ATGTTCCTGG AATCCCAATC TATAATTGAC TATAGCATGC 
    TATTGGGAAT CCATTTCCGA GCTCCCAATC ACCTGAAGCG TATCACATCA 
    TGTCAGAACG CTCTTGAAAG TACTGGAATT TCAGCTGAAA CGGAATGTAG 
    TGTTGCACTG CATCATGAGG AGACAATTTC TTCAAAGGGA TTTCTACTAG 
    TTGCTGCTGA TGAGCCAGGT CCAGCAGTAC GTGGTTCGCA CATAAGAGGA 
    AGCATGGTTA GGGCAGCAGA AGGTGGTTAT GAAGAAGTTG ATCTTGTTTT 
    GCCAGGCACT GGAAGGTTCC GTGTTCAGCT AGGGGTGAAT ATGCCAGCTC 
    GAGCTCGGAA AGTGCAAGAG GACGTGAACG TAGAAGTAGA AAACAGGGAC 
    ACCATTGAAG AGTATGATGT TGTCCTATAC CTTGGTATCA TCGACATACT 
    ACAAGAGTAT AATGTGTCCA AAAGAGTTGA GCATGCTGTC AAATCACTAA 
    AATTCGACCC TCTTTCGATA TCAGCTGTTG ATCCAAATTT GTATTCGAGA 
    CGATTTATAA GTTTCTTGGA GAAGGTTTTC CCCGAGCAAG ATTGAACAGT 
    AAATAGATAT TGCAAGTTTC TTGG

    Gene models with high sequence identity

    1. AT1G10900.1 [+] show detail - Phosphatidylinositol-4-phosphate 5-kinase family protein
      E-value: 3e-62; Score: 236.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMSmart Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup 0.0000000045
    HMMSmart Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup 0.0000000043
    HMMPanther PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1.6e-22
    HMMPanther Phosphatidylinositol-4-phosphate 5-kinase, core 1.6e-22
    HMMPanther PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 2.8e-57
    HMMPanther Phosphatidylinositol-4-phosphate 5-kinase, core 2.8e-57
    HMMPanther PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1.4e-50
    HMMPanther Phosphatidylinositol-4-phosphate 5-kinase, core 1.4e-50
    superfamily SAICAR synthase-like 0.00000000000024
    superfamily SAICAR synthase-like 2.8e-32
    superfamily SAICAR synthase-like 4.9e-33
    Gene3D no description 0.0000000013
    Gene3D no description 0.000000000014
    Gene3D no description 0.00000000041
    Gene3D no description 1.4e-28
    ProfileScan Phosphatidylinositol-4-phosphate 5-kinase, core 17.218
    ProfileScan Phosphatidylinositol-4-phosphate 5-kinase, core 22.46
    ProfileScan Phosphatidylinositol-4-phosphate 5-kinase, core 21.334
    HMMPfam Phosphatidylinositol-4-phosphate 5-kinase, core 0.0000000000027
    HMMPfam Phosphatidylinositol-4-phosphate 5-kinase, core 9.3e-34
    HMMPfam Phosphatidylinositol-4-phosphate 5-kinase, core 1.8e-32

    See the detailed result >

    AT1G10900.1

    Model type
    Protein coding
    Short Description
    Phosphatidylinositol-4-phosphate 5-kinase family protein
    Computational Description
    Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1); Has 26222 Blast hits to 7747 proteins in 608 species: Archae - 0; Bacteria - 3917; Metazoa - 3982; Fungi - 423; Plants - 1715; Viruses - 0; Other Eukaryotes - 16185 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR