K08527

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08527

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K08527

Determination of introduced cDNA(s)

  • J033034B16 - Rice Full-length cDNAs - Original: J033034B16

    full reading [+] show sequence

    Nucleotide sequence: J033034B16 - full reading 
    GGCCGTCGCC GCCACCGCCA CCGCCTTCCC CTCGATCGCC GGAGCGGCGA 
    GCCCACGGCG GCGAGCGCCG CAGCCATGTC GCGGGCTCTC CTCCCGCGCG 
    GCAGCATTCT ACTCGTCCTT CGACCGCGAG TCCCGTCCAC ACCCCACCGA 
    TGCTTCGCGA TTGGGGCGGC GGCGGCAGTT GACGGCGGCG AGACGTGGCG 
    GGGGCAACTC CGGCAGGGGG AGGGGGAGGG GAGGAGCAGG GCGGTGAAGG 
    TGTCGGTGTG GTGGGACTTC CAGAGCTGCC ACCTCCCGCA GGGCGCCAAC 
    CCGTGCCGCG TCGCCACGCG CGTCACGGCG GCGCTGCGGG ACGCCGGCAT 
    CCGCGGCCCC GTCGACATCA CCGCCTTAGG CGACGCCTAC ATGCTCCCCC 
    GCGCCGTCCA GGAGGCTCTC GCCGCCACCG GCGTCGCCTT CTCGCACGTC 
    CCTTCCAGTG GAAAGGGCGG TCCCGACCAA TTGTTCATGG CTGATCTGAC 
    CTATTGGATT GCTCAGAATC CTCCACCGGC CCATTTCTTC CTTATATCTG 
    GCAACAAAGG CCTTGCAAAC ATTCTGCATC GCCTCCGGAT GAGCAATTAT 
    AATGTACTGC TTGCATGCCC CAGTGCTGAC TCTAGTGTAT TGTGCAGTGC 
    AGCAACGATT ATGTGGCCAT GGGATGCTTT AGTTAAAGGG TTGGATTTCT 
    CACCAAAACA TTTTAACCAA CCACCTGATG GTATATCCTT TTCTTGGTAC 
    GGTCACTATA GGGGACCCCT TGATGACTTG TTCTTGAACT CAGAGTCAGA 
    TGACTCTATG GCAGAGTCAG AGGACTCCCT GGCAGAGTCA AGGGACCCCA 
    AGGCTTTTCA ACCACATACC AAGTCAGTGA AACCACCTAT TTTACCCAAA 
    TCTGTGGCCA ATGGGGTTAG GCAAGTACTG TACTCCTTTC CTGAAGGTAT 
    CAGTCTTCCA AATCTTCGAG CAGAGCTTAG AAAGAATCAT GTGTTCATGG 
    ATAAAGGATT ATTTGGCTTC AAAAACTTCT CTTCTCTTCT CCAAGCCATG 
    CCTGATGTTG TGAAGTTTAT AGATCCTCTA CCAGGTGAAA GAAACCAGCC 
    TGCTGTGGTT GGGGTTTCCA AGAGATCAAT GGAGCCTGCT GAGCAAATTT 
    ACAAGGGAAA GAGTTCTGCT CAAAGCAGTG GTGAGTTCAA ACGCCTCGTT 
    CAGACTCTTA ATGAGAAACC ACCATCATCA CATGTCCCAT CTTCTTCATC 
    AGATATTTTA TCTGCGGACC GCAAGAAAGT TCTAGCAGTT GATGCCCCAT 
    CTTCCCAATC TGACTTGTTA TCTAGGAACC AAGAGAAAGC TCCCCCTGTT 
    GATTTGACTA CACAACCTGA AACACCTGCA AGCTGTATGG AAGCTGATGT 
    GGAGAGTGTT GCTGGAGCTT CTGCCTTTAC AGGAGAGCAA ATTACTGTTG 
    ACAAAAAGGG GCTATTTGAA AGGATTTGTG TACTATGGAA TGATACAGAG 
    CCTGTTAAGC CTATGCTTTC TCCGTCTCAA GATGATACCC ATTCTAAAGG 
    CTCCAATGAT TTACTAACTC AGTATGCCAA TAGTAACGAA CATAACAGTC 
    TTTTGACAAG GACCTTGAAG ATCTTTTCCA CAACTGACAA TTCAGATGGA 
    GACAATGTTG ACAGCACTTC AGCAATTAGC AGCAGTTTCT CAAATATGAC 
    TGCCAATGAC CATTCGGACA AATTAAATGT CAAGGAGAAT GTAGGGAATA 
    CGATCATCCA TTCTAGTAGA TCAGTTGACA CGAGCAACGC TGAACATAAA 
    GTTGGGTTTA TAGAAAAAAG CAAAGGAATA TTTAGCTGGG CTGCAAAGTG 
    GTGGGCGTCT GGAAAACCAG ACACAGATGA CAATTTAAGT TCAGTACATA 
    TCAATGATGG AACAAGGGAA GAATCAGAAA AAGAATCTGC ATTTGTAAAG 
    ACAGCTGCTA CTGCAAGTGA ACAGCAAGTA GGAGTTGAAC TGTTCATGAA 
    ACCTTACTTC TGGGATGCAC TACAGCAATA TTTGTCTACC CCTCATGGAT 
    CAGATCTTGT TTCAAAAGCA AAGACAAGGG AGGAGTTAGC GCATGGACTA 
    CAGAAGCAAG GCCATTGGCC TCTAAAAAGC CTTGGTGGGA AACACCACCA 
    CCAATTAGTA GATTTGCTTA TCTCAGAAAA GCAATGGATC AAAGAATCTT 
    CATCACAAAC GTCTCCTTTT CGACTTGCCC TCCCCCAGAG AAGAGCTCGT 
    TCTCCACTAC TTTCATTTTT TACGAATGGG AGGCCATCAG GCCAGCGTAA 
    ACATGTCGAT GACAGAAGCC CAACTCTGTC TAGAACGTCG GTCCATGTTT 
    TACCTACAAA AAATGGGAAG GGTCAGGCCA GCTGCAAGAG CAATGAGAAT 
    CAAAGTAAGA GTGATGACTT TTTGGAGAAA GAGCTTGGTC CAGTATCTGA 
    CAGTGGTAAA CCATATCGAC AAAATGATAA AGCAGTCCGG CATCATCCTC 
    CTACCTGTTC AGATGATGAA TTTTCTGATG ATGAAAATCA TGAGGTGGTC 
    CAAGAGGCTG GGAGAGATGC AGCACAAAGT TCACTCTTCA AAATTATTGA 
    TTCGTGGAAC ACTAGTAAGA CTATTTGTTC TAGCAAGAAA CAGCACGGCA 
    TTGGTGGTAT AGTGGACTGC TCTAGAATCA ACAGAGGTAA TGGTGGTGAC 
    AATTCGATCA CAGAAAATGC AGAAAAGGCT ACAAGCTTAT CAAAACATTC 
    TTATATGACC TCAGATTCAG ATTCAGATTC AGATGAAGAG AAGTTATTCA 
    ACAGTGTCTT GGGCAGTCTG CAGAATGCAA AGAACTCAAG TTTGCCCGGT 
    TGAAATGATG TATGCAGTCA TACTAACCCC ATGAACTCTT CTGTAATCAA 
    TTTGGTTCCA TACCATCATG TGATAATTTG ATCTTTCTGC CATTCTGGGC 
    TAGGTGGAGG CGTGGAGCAG CTTGAGGATG CTTTAGAAAC ATCTTCCCAA 
    GCTCAGTTAG ATTTATGAAG ATCACGTTAC AGTAGAATGT TCTGTTTATT 
    TTTTATTTTG TTGGAGAGGA ATCCTCATAT TCTTTTGAGA TGCTAAGGTT 
    TGTGCTGGTG TAGTTAATT

    Gene models with high sequence identity

    1. AT5G09840.1 [+] show detail - Putative endonuclease or glycosyl hydrolase
      E-value: 9e-89; Score: 325.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G09840.1

    Model type
    Protein coding
    Short Description
    Putative endonuclease or glycosyl hydrolase
    Computational Description
    Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT5G64710.1); Has 416 Blast hits to 392 proteins in 63 species: Archae - 2; Bacteria - 5; Metazoa - 78; Fungi - 41; Plants - 277; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR