K08530

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08530

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K08530

Determination of introduced cDNA(s)

J033083E22 - Rice Full-length cDNAs - Original: J033083E22

full reading [+] show sequence

GAATCCCTCA TCATTTCCCC CAAAATCGCG CGGCCGTCTC CGGCCAAATC 
CACGCCGCCG CCGCCGCCGC CGCCGCCGCC GCCGAGGACG ACGCAGCGGT 
GCCCTCGTTT CGGCCTCCCG TATCGCCCTC CGTCGAGCCG AGCCACCGAG 
ACTGGCTGCG TGGTATCGTC CTCACGAGGA GCGGCAATCC GAAGGAGCGC 
CTCCTCCCGA TGAAGACCAT ATGCGGATCC CTCATGCACG AGCTCCAGGT 
CATCTGGGAC GAGGTCGGGG AGCCCGAGGC CGCGAGGGAC AGGATGCTGC 
TGGAGCTCGA GCAGGAGTGC CTGGAGGTGT ACAGGAGGAA GGTGGACCAG 
GCGAACCGCT CCCGCGCCCA GCTGCGGCAG GCGATCGCTC AATATGAAGC 
TGAACTCGCC GCCATCTGCT CCGCCATTGG CGAGACGACG GTCCACGTCA 
GGCAGTCTAA TCAGAAAGCA TGTGGATTAC GGGATGAGCT CGGTGCAATA 
TTACCATACC TAGAAGAGAT GAAGAGGAAG AAGGTTGAAA GATGGAACCA 
GTTTCTTGAT GTCGTAGGAA GGATAAAGAA GATCTCATCT GAGATAAGGC 
CAGCAAATTT TGACCCTTTT AAAGTGTCTG TGGATCAATC TGATCTATCA 
TTAAGAAAGC TTGAAGAGTT AAGGGTGGAG CTGAAGTGCC TTGAAAAGGA 
GAAGGGTGAG AGGGTAAAGC AAGTTATGGA ATATTTGAAG ACTTTACATT 
CTTTATGTGT AGTACTTGGT GTCGACTTCA AGAAAACAAT ATCTGAAATA 
CACCCTAGTC TTGATGAAGC TGAAGGGCCA AGGAATATAA GCAACACTAC 
AATTGAGATG CTAGCATGGG CGATTCAGAG ACTTCGTGAA ACAAAAATGC 
AGAGGATGCA GAAGCTTCAA GATCTTGCAT CTACCTTGCT AGAACTATGG 
AATCTAATGG ATACGCCATT TGAAGAGCAG CAGGCATACC AGAATATAAC 
ATGTAATATT GCTGCTTCAG AGGCTGAATT AACAGAACAG AACACCCTTT 
CCATTGAGTT CCTCAACTAT GTGGAAGCTG AGGTATTAAG GCTTGAACAG 
CACAAAGCAA GCAAAATGAA GGAGCTTGTT CTCAAGAAGA AAACAGAACT 
AGAAGAACAT CGACGACGGG CACATTTAGT TGGAGAGGAA GGTTATGCAA 
CTCAGTTCAC AATTGAGGCC ATTGAAGCAG GGGCTATTGA TCCCTCTTTG 
TTGCTCGAGC AAATTGAGGC TTATATTTCA ACAGTGAAAG AGGAAGCTTT 
TAGCAGGAAG GACATTCTCG AGCGAGTTGA GAAGTGGCTA AATGCACGTG 
AGGAAGAGGC TTGGTTGGAA GATTACAACA AAGATGACAA CCGGTATAAT 
GCTGGGAGAG GTGCACACAT TATGCTTAAG AGGGCTGAAA AAGCGCGTGT 
TCTGGTTAGC AAGATTCCAG GAATGGTAGA TGTTCTTGAA ACAAAAACCA 
GAGCTTGGGA AACTGAAAGA GGCAATGAGT TCACATATGA TGGCGTCCGA 
CTTATATTGA TGCTTGAAGA ATACATGGTT GTTCGTCAAG AGAAAGAGCA 
GGAAAGGAAG AGGCAAAGGG ATCAAAAGAA GCTTCAAGAT CAACGCAAAG 
CTGAGCAGGA GGCACTTTAT GGATCAAAGC CAAGCTCTTC AAAATCTCAC 
AGCACTAAGA AGGTACCCAG AAACTCCACA CCTGGAGTTC AACCTCCTAA 
ATCAGAGATA CTTCATTCAA AGACTATTCG TGCAACCAAG AAAACGGAAG 
ATATCAACAC TCCTTCCCCT GGTCATAAAG GTTTAGACAC TGTTGGTCTC 
CCTATCAGGA AGTTATTTCC ATCTTCCAAC TCGAGCACTC TTCTTGAGAT 
GGAGACACCC CGGAAGCCCT TCTCTCAGAT TACACCTGGA AACATATCCT 
CAGCTCCTGT GCGTCCAATC TCCACTGGTG GTACTGAAGA GAACAGGACT 
CCCAAGACAT TTGCACCAGT TCCTACGACT CCGATGACAG TGAGCCCTCA 
TATGCAAATG GCAGTGACGC CTGTTCTTAC CGCAAAAGCT GTTTCTGTAC 
TCTCTTATGA CGAACCGGAG CTGACTTCAC AAGAGGACAC CGAGTACTCA 
TTTGAAGAGA AGCGTCTTGC AGTCTATCTT GCCGCACAAG TGGCTTGACT 
GTCAAGGATG CTGATACATC CGTTGTGTAG CTGAAAGTCT GAACCTTTGA 
TAGCATTTCT CATGTTACAG AGACTTGTGT AGGTCGACAG CAGTCGGCCT 
TATTCATAAC CATACTTTAC GTTTTCATCC CATTGTTAAA GTAGTTACCT 
TGTTACTGCT GGCACTTGTC ACCTGATGAT GTGAACCATT ACCTTTCTTC 
GCC

Gene models with high sequence identity

AT5G51600.1 [+] show detail - Microtubule associated protein (MAP65/ASE1) family protein
E-value: 4e-156; Score: 549.00

InterPro Scan Digest

Program	Description	E-value
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0
HMMPanther	Microtubule-associated protein, MAP65/ASE1-type	8.4e-110
HMMPfam	Microtubule-associated protein, MAP65/ASE1-type	7.4e-81

See the detailed result >

AT5G51600.1

Model type: Protein coding
Short Description: Microtubule associated protein (MAP65/ASE1) family protein
Curator Summary: Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.
Computational Description: PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink).
Link: InterPro Scan - TAIR