K08621

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08621

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K08621

Determination of introduced cDNA(s)

  • J023042N03 - Rice Full-length cDNAs - Original: J023042N03

    full reading [+] show sequence

    Nucleotide sequence: J023042N03 - full reading 
    GAGTGATGTG ATGATGGTGA AATGGAAGAA GTTGGCGTTT GGGAAAAAAG 
    GTCGCTTTCG AGGTCGAGCA GAGAAAAAAG GGAGGCCTTT GCGAGGCGAG 
    GAGAGCGAGA CCCCTGTGAT CCCAATTAAC CACCCGCCAC CGCCACGCCG 
    CCGGCGACCC CCTCCTCGGC GAGATCGAGA TCGAGATGCC GCCCACGCCG 
    CCGCCTGAGC TGGACCTCCT CGACACCGAG CCGGAGTTCG CCGAGGTTGA 
    CCCCACCGCC CGCTACGGAA GGTACACGGA GGTCCTCGGC AAGGGCGCCT 
    TCAAGACGGT CTATAAGGCT TTTGATCAAC TGGAAGGTCT GGAAGTTGCT 
    TGGAACCAGA TCAAAGTGGG TGATATACTT CGGAATAATG ATGACTTGGA 
    GAGACTTAGA TCAGAAGTCC GGTTGCTGAA GACCCTCAAG CATAAGAATA 
    TAATCAAGTT CTACAATTCT TGGCTCGACA AGAAAAACAA CAACATAAAT 
    TTCATCACAG AAGTCTTCAC ATCAGGGACA CTGCGCCAGT ACCGTATTAA 
    GCACAAGAAG GTAGATGTTA GAGCATTAAA GAAATGGTCA AGGCAAATCT 
    TGAGTGGCCT TGTCTACCTC CACAGTCATG ATCCACCAGT AATTCATAGA 
    GATCTTAAAT GTGACAACAT ATTTGTGAAC GGAAACCAGG GTGAAGTAAA 
    GATTGGAGAC CTTGGATTAG CAACCATCCT AGATAATGCA CGCTCAGCTC 
    ACAGTATCAT TGGCACACCG GAATTTATGG CTCCAGAACT CTATGATGAA 
    GAATACAATG AGCTTGTAGA CATCTATGCA TTTGGGATGT GTTTATTGGA 
    GCTTGTTACA TTTGAGTACC CATATTGTGA ATGTTCCAAT GCAGCGCAGA 
    TATACAAGAA AGTATCTGAT GGTGAAAAGC CTAGTTCTCT GGCTAAGATT 
    GAAGATCCTG AGGTTAGATT TTTTATCGAG AAGTGCATCG CTAAAGCTTC 
    ACAAAGACTA TCAGCACAAG AGCTATTGAT GGACCCATTT CTCCGAGATG 
    ATGGTGAAAA AATATTCTAT CCATTGCTGT CAAATACGAA GGCATCAGAT 
    GGTGCTGGCA GTTCAAACTC AAGCATGGGT TACAAATATG ACAGAGATGC 
    ATCATCTATG GCAATTCGGG AGCACACAGG TAGTTTTGCA GAAGAACACC 
    CAAGTGATAG GTACATACAC AGCACCATGG ATCCACAAGC AGCCGCTGGT 
    CGAATAATTA CAGTCGAGAG TCAAATGAAA GATCTGAATA CGATATTTTT 
    GAAACTGAGA ATTGCTGATT CAACAGGTCA TGCTCAAAAC ATCCATTTCC 
    CATTTGACAT TGAAGCAGAC ACTTCCATTA GTGTTGCAAC TGAGATGGTC 
    GTGCAGCTAG ATCTCACTGA CCAGGATGTT ACAGCGATTG CAGAAATGAT 
    AGATGCAGAA ATACGGGCTC ATATTCCTGA TTGGGCATTA GAAGAATCGG 
    TTGAAAACCA AGGAGATGAA AGAGCTCATT CTGAGACCGA CAGTTCAGAA 
    GCAGATGATG AAACTTCTGA GTTGCGTAAT GAGCCTAATG CTACACATAA 
    TGGTTTTGTC CAAGAACACC TTCCCTCCGG ACATAAGTAT TGGTCGGACT 
    CGCCCAGAAG AAACATTGAA ATGTCTCACT CCGCAGTCGA ACCACATATT 
    GGTGGTAATA TGCCTAATGG GATATTGAAG AAGAATGACA CTGATGACAC 
    AGTCAGCAAT CTTGGCACTT CTGTGGACTT GCCAAACCCA TCTATGATTA 
    ACAGGAAATC TGGAGTAGCT TCTGTCAGCA CCAGTCCTCA GTCTTTTGAT 
    GATGAGCATA TTGAAGCAGA TGTTAGCGAG AGGTTAGTGA ATTTGCTAGC 
    TCAGCAGCAA GAGGAGCTCA ACGTGCTGCG AAGGAAGCAC AAGGCTGACA 
    TAGAAGTCAT CTTGAAAGGT GTGCCTGAAG AGCATCGCGA AGAAACCTTA 
    ACTAGGTGCC GGCTGAAGGC AGATGAGAGA AACAGATCAG ACAAACCTTA 
    GCTGCAACAC ATTATCTTCA CCGTGTGATT TTTTTGTACC GGTGCCATGG 
    AGCTGTTTAG AACTATTGTT GTGCAAAAGG TGGTCTCAGC TGTTCACTGT 
    TCTTTTTTTT TCATGGAATG GAGGAGCTGC AAGTGTTTGT GGAATCTGTG 
    ACCAAGCGGT GCAATACATA TACGATACTG ATGTAGCTGT CTGGATTTTT 
    GTTTTTGTTT TTTGTTTCTT GAAGGCAAGA CAAAAGGTTT CTGCTCACCA 
    AACAAAATCT GCAGATACCA TTGTGTTACT GTATTCCTGA ATTGTTCATG 
    AGAAGTGCAC CTCCTTGTTT TTCTCCCTCT CTTTTTTTCC TTGTAATTTG 
    ATGATTTTTG GAACTAAGAA TTAATGTTAA TGATGTAATA CATCAGTGTT 
    TGAGCTGTTT CATACTACTA CTTGCAATGA AAAAACATAA GTTCCAATTA 
    CTTCC

    Gene models with high sequence identity

    1. AT3G48260.1 [+] show detail - with no lysine (K) kinase 3
      E-value: 2e-156; Score: 550.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Serine/threonine-protein kinase-like domain 5.9e-53
    Gene3D no description 2e-24
    Gene3D no description 1.5e-43
    Coil coiled-coil 0
    HMMPanther SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO 4.8e-171
    superfamily Protein kinase-like domain 1.8e-66
    HMMSmart Serine/threonine-protein kinase domain 3.2e-62
    HMMSmart Tyrosine-protein kinase, catalytic domain 3.4e-14
    ProfileScan Protein kinase, catalytic domain 41.121
    PatternScan Serine/threonine-protein kinase, active site 0

    See the detailed result >

    AT3G48260.1

    Model type
    Protein coding
    Short Description
    with no lysine (K) kinase 3
    Curator Summary
    Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases.
    Computational Description
    with no lysine (K) kinase 3 (WNK3); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 2 (TAIR:AT3G22420.1); Has 106620 Blast hits to 105555 proteins in 3648 species: Archae - 79; Bacteria - 10632; Metazoa - 39040; Fungi - 10406; Plants - 28734; Viruses - 420; Other Eukaryotes - 17309 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR