K09133

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09133

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09133

Determination of introduced cDNA(s)

  • J033149M05 - Rice Full-length cDNAs - Original: J033149M05

    full reading [+] show sequence

    Nucleotide sequence: J033149M05 - full reading
    GGTCTTCGTC GTCGCCATTA TCCCCATTTC TCCCGTATCC TCTCTCTCCT 
    CTCCTCTCTT CTCGAGCGCG GCGGCGGTGG TGGGGAGGAG GAGGGCCAGC
    GGCAGCAAGC GGCGGCGGCG ACGCGATGAT GATGACGCGG GCGTCGATGG
    GGGCGATGGA AGGCGCGGCG GTGGACGAGG TGGTGCGGCG CCTCGTGGAG
    GGCGGGCGCG GGGGGAGGCA GGTGCAGCTG TCGGAGGCGG AGATCCGGCA
    GCTCTGCGTC GAGGCGAAGC GGGTGCTCCT GTCGCAGCCG AACCTCCTGC
    GCATCCACGC CCCCGTCAAG ATCTGCGGTG ATATCCATGG GCAATTTGTT
    GATCTTCTGA GGCTGTTTGA TTTGGGCGGT TATCCTCCAA CTTCCACTTA
    TCTTTTCCTT GGAGATTATG TGGACAGAGG CAAACAAAGC TTGGAAACCA
    TATGCTTGCT TCTGGCATAC AAAGTGAAGT ATCCTGATAA GATTTTCCTG
    TTAAGGGGAA ACCATGAAGA TGCGAAAATT AACAGAGTGT ATGGTTTCTA
    TGATGAATGT AAGAGGCGAT TCAATGTTCG ACTGTGGAAG ATTTTCTGTG
    ATTGCTTCAA CTGCTTGCCT ATGGCAGCAC TCATTGACGA TAAGATACTC
    TGCATGCATG GTGGCCTCTC ACCTGAACTG AATAGCTTGG ATCAAATAAA
    GGATATCGAG AGGCCCACTG AGATTCCTGA CTATGGTCTT TTGTGTGATT
    TAGTTTGGTC TGATCCTAGT CCTGACTCAG AAGGGTGGGG AGAGAGTGAC
    AGAGGTGTTT CCTGCACTTT TGGTGCAGAT AAGCTTGTAG AATTTTTGGA
    GAAGAATGAT CTTGATCTTA TATGCCGCGC TCATCAGGTT GTTGAGGATG
    GCTACGAGTT CTTTGCGCAA AGGAGATTAG TGACAATCTT TTCAGCTCCA
    AACTATTGTG GGGAATTTGA TAATGCGGGT GCTCTGTTGA GCATAGATGA
    AAGTTTAATG TGTTCTTTTC AAATCTTGAA GCCAAATGAT ACAGGGGCTC
    CACATTCAAG GAAACCAACT TCAAACAAGA CCCCAAAAAC TGGAAACGCT
    TAACTTATAT TATATCAAGC TACAAAGCAT AATTGTTGTC AGCCCGAAGG
    GGGTGATCTC TTTTATGTCT CGGATCCACC AGGGCATGGC ATTAGTCTTC
    TCCAGCCAAT ATCATTTCCT CCTTGAGTGG CATGCTCTCC GCTGCTCGCT
    GGATATGTGT TGACTCCACA GGCGGTACTG CATTGTTGTA CAGCAGCAGT
    CTATCTGACT CAGCAGCTCA TTCATTCTGA TCCTCTTTTT TTTGTTTATC
    TTGCCGCTGC AATGTTTGGC GGCACAATGT GTTTTGTCGT GGATGCAGTA
    GTTCCTCTTT TTGTTAGTTT CTTAGTGTGG TTTCTTTGCC TGGTTGCTGT
    GAGCTGTGTT TGCTTATGTA TCATCTTAAT TAGATCATGA GATATATGCT
    TGGTGGAATT GTGTAACCCG TTTTCTGTTT C

    Gene models with high sequence identity

    1. AT3G05580.1 [+] show detail - Calcineurin-like metallo-phosphoesterase superfamily protein
      E-value: 2e-136; Score: 483.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 0
    HMMPfam Metallophosphoesterase 1.2e-47
    superfamily Metallo-dependent phosphatases 6.2e-130
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 3.9e-94
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 3.9e-94
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 3.9e-94
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 3.9e-94
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 3.9e-94
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 3.9e-94
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 3.9e-94
    Gene3D no description 1e-124
    HMMPanther Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 8e-202
    HMMSmart Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 4.5e-164

    See the detailed result >

    AT3G05580.1

    Model type
    Protein coding
    Short Description
    Calcineurin-like metallo-phosphoesterase superfamily protein
    Computational Description
    Calcineurin-like metallo-phosphoesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT5G27840.1); Has 7114 Blast hits to 6926 proteins in 613 species: Archae - 78; Bacteria - 489; Metazoa - 2408; Fungi - 1415; Plants - 981; Viruses - 10; Other Eukaryotes - 1733 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR