K09149

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09149

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09149

Determination of introduced cDNA(s)

J013162A14 - Rice Full-length cDNAs - Original: J013162A14

full reading [+] show sequence

TCACCCAACT CTCACCTACT CTGCTTCTGC TGCCCTCCTG CATCGACTCA 
CTCCTCCACT CCCGTGTCGT CGTCGTCGTC GTCGTCTGCT TCGTCGGCCG 
CCGCGCGCCG CCCGCGATGG CGTCGTCGGG GGACAGCAGC GGCAAGCAGC 
GGAGCGACGA GGAGTGGCGC GCCGTCCTCT CCCCGGAGCA GTTCCGCATC 
CTCCGCCTCA AGGGCACCGA GTTACCTGGA ACAGGTGAGT ACAACAAGTT 
CTATGGTGAT GGGGTCTACA ACTGTGCTGG CTGTGGAACA CCCCTGTACA 
AATCCACAAC CAAGTTTGAT TCTGGTTGTG GCTGGCCAGC ATTTTTTGAG 
GGACTTCCTG GAGCCATAAA CCGAACACCG GATCCTGATG GAAGGAGGGT 
AGAAATCACG TGTGCAGCTT GCGGTGGGCA TTTGGGTCAC GTGTTCAAAG 
GAGAAGGCTT CAAGACGCCT ACTGATGAGC GTCACTGTGT GAACAGTGTT 
TCGATCAAGT TCACCCCGGC CTCCTAAATC CTTTCCCAGG TCATTATTAT 
TGGAGGTGAA TTCCCCAGGG CTAAAGCTGT GGAAAGCACT ACAAAATAAT 
GAATAAAATC ACAGAGACAT ATCCTGTTTG TCCATATATG AATTCATCTC 
CTGTTAATTT AGCTGTAAAC TTGTAACTTA ACATTGCTGG GAATGGTAAA 
TGAATGAATA AATGAATCTG GTTCATT

Gene models with high sequence identity

AT4G21860.3 [+] show detail - methionine sulfoxide reductase B 2
E-value: 1e-65; Score: 246.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Mss4-like	1e-47
HMMTigr	Methionine sulphoxide reductase B	1.4e-46
HMMPfam	Methionine sulphoxide reductase B	2.5e-52
HMMPanther	METHIONINE SULFOXIDE REDUCTASE	7.6e-55

See the detailed result >

AT4G21860.3

Model type: Protein coding
Short Description: methionine sulfoxide reductase B 2
Computational Description: methionine sulfoxide reductase B 2 (MSRB2); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1).
Link: InterPro Scan - TAIR