K09207

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09207

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09207

Determination of introduced cDNA(s)

  • J033148J17 - Rice Full-length cDNAs - Original: J033148J17

    full reading [+] show sequence

    Nucleotide sequence: J033148J17 - full reading 
    GATGTGGTAG GAGGATGGCG TTATATGTTT GGTTTTGGTG CTCCACTGGC 
    AGTAATAATG GCTATTGGTA TGTGGAATTT ACCGCCTTCA CCAAGATGGC 
    TTCTTCTCAG GGCAGTTCAA GGAAAGGCGT CAGTGGAAGA TAACAAAAAG 
    AAGGCAATTC AGGCATTGAG ATCACTGAGG GGGCGCTTTA GGAGTGACAG 
    GGTCTTAGCA GATGAGATTG ATGATACCCT TCTCTCTATT AAGGCTGCTT 
    ATGCAGAACA AGAATCTGAA GGGAACATTT GGAAGATGTT TGAGGGAGCT 
    AGCTTGAAGG CACTCATCAT TGGAGGAGGA CTGGTTCTCT TCCAGCAGAT 
    AACAGGCCAG CCAAGTGTTC TATACTATGC AACTTCCATT CTTCAGACTG 
    CTGGGTTTGC AGCTGCATCT GATGCTGCCA AAGTATCAAT TTTGATTGGG 
    TTGTTCAAGT TGTTGATGAC AGGTGTTGCA GTATTTAAAG TTGACGATCT 
    TGGAAGGCGT CCACTACTTA TAGGAGGCAT TGGTGGAATA GCTGTTTCAC 
    TGTTCTTATT AGCAGCTTAC TACAAGATTC TGAACAGCTT CCCTTTTGTC 
    GCTGTTGGTG CTTTACTTCT GTATGTCGGT TCTTACCAGG TATCGTTTGG 
    TCCAATAAGT TGGCTAATGG TTTCTGAGAT CTTCCCACTC CGAACAAGAG 
    GACGTGGGAT CAGCCTTGCA GTACTTACAA ATTTCGGCTC AAATGCACTG 
    GTGACATTTG CCTTTTCACC CTTGCAGGAA TTCCTTGGAC CAGCCAATAT 
    TTTCCTTCTA TTTGGAGCCA TATCGTTGCT CTCCCTTGTG TTTGTCATCC 
    TAAAAGTTCC AGAGACTAAA GGACTTACAT TGGAGGAGAT CGAATCCAAG 
    CTCCTGAAGT AAGCTCACTG GTACTCAAGT TGTATGTGTG TGTGTGTTTT 
    TTTTGAGGGC AAGTTGCTAT GTGTTCATTA GATGAGGTTG ATACGTGTCG 
    GTGTAAATTT GTTCAGTCGA TTTATGTGAT TAATATAGTC GTACATGTAG 
    TATTTTGTAC ATGTAAATTC TTGTTTGGAC TAAAAATATT CTAGAGAAAT 
    CCAAAAAAGC TGTTCTTG

    Gene models with high sequence identity

    1. AT5G59250.1 [+] show detail - Major facilitator superfamily protein
      E-value: 3e-118; Score: 422.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther PTHR11600:SF83 1.59998835313659e-80
    FPrintScan Sugar/inositol transporter 0.000000000409999599045784
    FPrintScan Sugar/inositol transporter 0.000000000409999599045784
    FPrintScan Sugar/inositol transporter 0.000000000409999599045784
    HMMPfam General substrate transporter 5.40000000000002e-55
    HMMPanther PTHR11600 1.59998835313659e-80
    ProfileScan MFS 0
    superfamily Major facilitator superfamily, general substrate transporter 3.39999972437687e-35

    See the detailed result >

    AT5G59250.1

    Model type
    Protein coding
    Short Description
    Major facilitator superfamily protein
    Computational Description
    Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G17010.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR