K09447

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) abnormal (PATO:0000460) (Rosette leaf::Others)
	stem (PO:0009047)	abnormal (PATO:0000460) (Stem::Shape::zigzag)
T2
	cauline leaf (PO:0000013)	dark green (PATO:0001249) (Cauline leaf::Color::dark)
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) epinastic (PATO:0000945) (Rosette leaf::Shape::epinastic) dark green (PATO:0001249) (Rosette leaf::Color::dark) abnormal (PATO:0000460) (Rosette leaf::Others)
	stem (PO:0009047)	increased thickness (PATO:0000591) (Stem::Shape::thick) abnormal (PATO:0000460) (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09447

Determination of introduced cDNA(s)

J023109C12 - Rice Full-length cDNAs - Original: J023109C12

full reading [+] show sequence

GGGGTGAAAT TACCCCCACA AAAACCAACT CTGCAACTCT TTACCTTTTT 
TAGTTTGCCT TTGTTCTTTG CGGTGTTTCG TTTTCACATC CCTGGAAATT 
TTCAGAGCAA AGACAACGTT TGTTGCAAGA GGAAAGAGGG TGGATTGGTC 
AGGTTTGGTT GCAGCTTGGA TTTTTTCTTA AGAAACAAAA GGCAGCATTG 
CAGCTTAATT GATCTGGAGG GAGAGGAAAG ACAAAGATTT TTGTAATTGG 
AAATATATCG TCGTGTCAGC GGAATGCTTC TTGTGGATGT GGTGAAGACC 
GGCTGAGTTC AAGCAATTCA TGCTATGTTT ATTCTAGTGC AGAGTACGGG 
ATAATTTATG TTCCAAAAGG AATTAAATGG TCCATAAGCA GGAAGGCAAT 
AACAGTGAAC AGATGAGCAC CACTCCTGCC CCTCCGGGCG AAACCAGTAG 
ACAGATTCCA TCTAGAGATG ATGCCAAACA TGAGAAGGAA GCGGCCAACT 
CCTCATCTTC CTCATCATCA GAGGAAATAG ACGAGGATGA TTTCTTTCAG 
ATAGAAGGCC CAATACTCAG TACCCAGTAC TCCCTGTCTC CTCCACCTGC 
AGAAGGTGGC AACCGAGACG CAAAGCAGGC AGATGAACCC CATGACCCAA 
AGAGGATCCC GTCCGCTGTC TTTGCGAGAT CCAAGTCATC AACACCAACT 
GACTGGAGCA TCACCTCCAA TGAATCTCTC TTTAGCATCA ATGTCGGGAA 
TGCGAGCTTC TCCAAGGATC ACATGTTTTT GTATGGCAAG TCAGGAGAGC 
TGGGTGCTAA TGATCCATTG CCACCATTGC CAAAGCAGAG CCCAAGCTCC 
AGCCCTCTAA AAGGTGAGGT GGCCACACCA GAGAAGCCTA GTACTTCCAA 
GGAGAAGGGG GATGGGCGTG GACTCACAGA CCGGAATGGG GACGACAATA 
CAGACTATAC CCATAGCTCG TCACACCGAT CTGATGGAAG CACAACAAGT 
TTTGCATTTC CAATATTGAC AGGGTCAGCG AAAACAAGTG GGTCCTTGAA 
AGATAGCCAT CCGGAGTTAG CTCGGCAAAC CACGGCGCAG CTGACGCATC 
CCAGCGAGAT GCGTGATGAG AATGAGAATA AGGAAACACC ATTTCCAGCA 
GTTGTAATGG AGGCACCAAA AGTCGAAGCA ACCCCAGCAG CAGCAGCAAC 
AGCACCTGCA CCACCAGCAC CACCGGCCAC AACAAAATGG TTTCCTTGCT 
GTTCATGCTG CCCTTTCTGT TGCTAACAGC AAAGGGATAT GCAACTTCAT 
CATCCATGTC CATTTGCCTA TTGAATCCTT AACTAGTGGA AAGCTTTGAG 
CATTCGACAC ATTCATTTAT ACATGCTGAC ATTAGTACAA GGATAAAATT 
CCTGGTTCAA AAGGAACATC GGAAACCAAT TAATTATTTG CTCTG

Gene models with high sequence identity

AT2G03630.2 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
E-value: 1e-11; Score: 68.20

InterPro Scan Digest

See the detailed result >

AT2G03630.2

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 87 Blast hits to 87 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR