K09451

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09451

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09451

Determination of introduced cDNA(s)

  • J033048K03 - Rice Full-length cDNAs - Original: J033048K03

    full reading [+] show sequence

    Nucleotide sequence: J033048K03 - full reading 
    GGATCTGCTG CGAGAAGCGT GGCCATGGCC ATGGTGGAGA AGACGGTGCT 
    GCTCTACCCT TGCCCTGCGG TGGGCCATCT CAACCCCATG GTGCAGCTCG 
    CCGAGGCCCT CGTCCGCCGC GGTGTCTCCG TCACCCTCGC CGTCGCCGAC 
    CCGCCTGACA AGGGCGCTGT GCTGGCCGGC GCGATCGCCC GCATCGCCGC 
    CGTGTGCCCC TCCATCGGTG TCCGCCTCCT TCCCATCCCG TCCTGCGAGG 
    GCAAGACGTA CTCCCACCCC GTCATGTGGA TCGTCGACGC GCTCCGCCTC 
    GCCAACCCCG TGCTCCGGGA GCTCCTGCGC TCGTTCCCTG CTGCCGTCGA 
    CGCTCTCGTG GTCGACATGT TCTGCATCGA CGCGCTCGAC GTCGCCGCCG 
    AGCTCGCCGT CCCGGCCTAC ATGTTCTACC CGTCTGCGGC CAGCGACCTA 
    GCGATCTACC TCCAGGTTCC GCATGTCGCC CGCTCGGCTC CATCCTCTTT 
    CAAGGACATG GCCGACACGG TGCTGAGCTT CTCCGGCGTG CCGACGATTC 
    GCGCGCTGGA CATGCCGGAC ACCATGCAAG ACAGGGAGAG CGACGTGGGC 
    ACGACCCGGA TTCACCACTG CTCCCGGATG GCTGAAGCGA GAGGCATTCT 
    GGTGAACAGC TTCGATTGGT TGGAGACGAG GGCCCTGAAA GCGATCCGCG 
    GCGGCCTCTG CCTGCCGTCC GGCCGCTCGG TGCCCGCGAT CTACTGCGTT 
    GGGCCGCTGG TCGATGGGGG CAAGCTCAAG GAGAACGACG CGCGGCACGA 
    GTGCCTCGAG TGGCTGGACC GCCAACCGAA GCAGAGCGTG GTGTTCCTCT 
    GCTTCGGGAG CAGGGGCACT TTCTCGGTGT CGCAGCTGAG CGAGATGGCT 
    CGGGGGATAG AGAACTCCGG ACACAGATTC CTGTGGGCTG TGCGTAGCAA 
    CCTCGGCGAG GTGGACTTGG AGGCGTTGTT TCCGGAAGGG TTCTTGGAGA 
    GGACCCAAGG CAGGGGATTC GTCGTGAAGA ACTGGGCGCC GCAGTCGGCG 
    GTGCTGCAGC ACGGCGCCGT CGGCGCGTTC GTGACGCACT GCGGGTGGAA 
    CTCGTCGCTG GAGGCGATCA TGTCCGGCGT GCCGATGATC TGCTGGCCGC 
    TGTACGCGGA GCAGAGGCTG AACAAAGCGC ACCTGGTGGA GGAGATGAAG 
    CTTGGGGTGT TGGTGGAGGG CTACGACGGC GAGCTTGTTA AGGCCGACGA 
    GCTGGAGACC AAGGTTCGGC TGGTGATGGA GTCGGAGGAA GGGAAGAGGC 
    TTAGGGAGAG GTCGGCGATG GCCAAGGAGA TGGCTGCTGA TGCCGTCAAA 
    GATGGGGGTT CGTCTGACAT GGCGTTCGCC GAATTCCTGA ACAATTTGGG 
    GACGAACAAC GTGAAAAGCG GCCCGAGAGA TACACCCGTG CATGACTGAA 
    ACACTGTAGC CGAGTTGGTT TTAGCAGGAC CGAGAATAAT GTTCTTCAGT 
    ATATTTAGAT TTCGTCAGAT TTTAGAGTTG TTCATGTCGT GATGTGGCCG 
    AATCTGTATG AGACTACGGT GCAACTATGC TAGCGCATCT CATGCAAAGT 
    CCGGGCATCC TTACAGAGAA CACACTAATT TATTTCCCAG TTTTTTCTCC 
    C

    Gene models with high sequence identity

    1. AT3G16520.3 [+] show detail - UDP-glucosyl transferase 88A1
      E-value: 1e-83; Score: 307.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 1.3e-27
    HMMPanther UDP-GLUCOSYLTRANSFERASE 1.9e-106
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 1.9e-106
    Gene3D no description 6.4e-18
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 8.1e-63
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0

    See the detailed result >

    AT3G16520.3

    Model type
    Protein coding
    Short Description
    UDP-glucosyl transferase 88A1
    Computational Description
    UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7523 Blast hits to 7470 proteins in 455 species: Archae - 0; Bacteria - 255; Metazoa - 2062; Fungi - 26; Plants - 5000; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR