K09550

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09550

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: K09550

Determination of introduced cDNA(s)

  • J013132G13 - Rice Full-length cDNAs - Original: J013132G13

    full reading [+] show sequence

    Nucleotide sequence: J013132G13 - full reading 
    GGCCCTCCTC ACTGAAAACA GTAAACAGGA CACGGTTCAG TGACCACACG 
    AGGTTCACGA GTACAGTGAC GCATACAGAG ACATGGGCTC CATCGCGGCC 
    GACGGCGACA AGCCGCACGC CGTGTGCATG CCGTTCCCGG CGCAGGGGCA 
    CGTCACGCCC ATGCTGAAGC TCGCCAAGAT CCTCCACCAC CGTGGCTTCC 
    ACATCACCTT CGTCAACACC GAGTTCAACC ACCGCCGCCT CCTCCGCTCC 
    CGCGGCGCCG CCGCGCTGGA CGGCCTCCCG GGGTTCCGCT TCGCCGCCAT 
    CCCGGACGGC CTCCCGCCGT CCGACGCCGA CGCGACGCAG GACGTGCCCC 
    CGCTCTGCCG CTCCACCAGG GAGACGTGCC TCCCTCACTT CAGCCGCCTC 
    CTCGCCGACC TCAACGCCAA CGCCTCCCCC GAGTCCCCGC CCGTCACGTG 
    CGTCGTCGCC GACGACGTCA TGAGCTTCGC CGTCGACGCC GCCAGGGAGT 
    TCCGCGTGCC GTGCGCGCTC TTCTGGACGG CCAGCGTCTG CGGCTACATG 
    GGCTACCGCT ACTACCGTTC CTTCCTCGAC AAGGGCATCT TCCCGCTCAA 
    AGGTAAACCC TGAGCTTTTA CGAGAAGAAA ATCGGTTTCC ATTCATGGGT 
    GGACACACGC ATGCATGCAG AGGAGCAGCT GACGAACGGG TTCTTGGACG 
    CGCCGGTGGA CTGGACGCCG GGGATGAGCA AGCACCTGCG GCTCAAGGAC 
    TTCCCGTCGT TCTTCCGCGC GACGGACCCC GACGAGTACA TGTTCCACTT 
    CGCGCTCCAC GTGACGGAGC GGCTGGCGGA GGCGGACGCC GCCGTGCTCA 
    ACACCTTCGA CGAGCTCGAG CCGGAGGCGC TCGACGCGAT GCGCGCGATG 
    CTGCCGCCGT CGGTGTCCAT CCGCACCATC GGCCCGCTCG GGTTCCTCGC 
    CGAGCAGGTC GTTCCCAAGG GGAGCCCCCT CGACGCGCTG GGCTCCAACC 
    TGTGGAAGGA GGACGACTCC TGCTTCGGCT GGCTCGACGG CAAGCCGCCC 
    CGGTCGGTGG TGTTCGTTAA CTACGGCAGC GTCACGGTGA TGACGAACGA 
    GGAGCTGGTT GAGTTCGCGT GGGGGCTCGC CAACAGCGGC CACGACTTCC 
    TGTGGATCGT CCGCCCCGAC CTCATCCACG GCGATGCCGC CGTGCTGCCG 
    CCGGAGTTCA TGGAGTCCGT CGGGGGGCGC GGCCTGCTGG CGAGCTGGTG 
    CCCGCAGGAG GCGGTGCTGC GGCACGAGGC GGTGGGCGTG TTCCTGACGC 
    ACTCCGGCTG GAACTCGACG GTGGAGAGCC TCTGCGGCGG GGTGCCGATG 
    CTGTGCTGGC CATTCTTCGC GGAGCAGCAG ACCAACCGCC GGTACAGCTG 
    CACCGAGTGG GGCGTCGCCA TGGAGATCGA CGACGACGTG CGGCGCGACG 
    CGGTGGAGGC CAAGATACGG GAGGCGATGG GAGGAGACAA GGGCCGGGAG 
    ATGCGCCGCC GGGCGGGCGA GTGGAAGGAG ACCGGCCTCC GCGCGACGCG 
    CCCCGGCGGC CGCGCGCACG CCAGCCTCGA CGCGCTGGTC GCCGACGTCC 
    TCCTCTCCGG TGGCAAGGCT CGGTAGGACA ACGTGCACTA GTGCCGCCTG 
    TTGCATGCTA CTCCCTCCCT CCCATAATAC AAGAGATTTT GAGTTTTTGC 
    TTGTAACGTT TTACCATTCG TCTTATTCAA AATTTTTTAA AATTATTATT 
    TATTTTAGG

    Gene models with high sequence identity

    1. AT1G22360.1 [+] show detail - UDP-glucosyl transferase 85A2
      E-value: 1e-140; Score: 187.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 9.8e-28
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0
    Gene3D no description 8.8e-14
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 5.8e-35
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 3.2e-16
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 7.4e-44
    HMMPanther UDP-GLUCOSYLTRANSFERASE 2.9e-80
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 2.9e-80

    See the detailed result >

    AT1G22360.1

    Model type
    Protein coding
    Short Description
    UDP-glucosyl transferase 85A2
    Computational Description
    UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7750 Blast hits to 7637 proteins in 383 species: Archae - 0; Bacteria - 124; Metazoa - 2215; Fungi - 30; Plants - 5218; Viruses - 99; Other Eukaryotes - 64 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR