K09650

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09650

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09650

Determination of introduced cDNA(s)

  • J033034G09 - Rice Full-length cDNAs - Original: J033034G09

    full reading [+] show sequence

    Nucleotide sequence: J033034G09 - full reading 
    GAGAGGGGGA GTCGTCGTCT CTGCTCTCCG GTCTCCAGAA AAGCAAAAGG 
    GGAGGCGAAG CCAAGCCAAC CCAACCACAC GCCAATCCAC TCGGAATCCG 
    CCTAGGGTTT CCTCCTCTTC CTCTTCCCCT CGCGGCTGCT GCTCGGCGGA 
    TTCTGCTGCT GCGGAGGAGG GCGGCGGGGG TTGGGGCTGC AAGCTGGTCC 
    GATCAGCTTT TCCTGCTGCT GAGGTAGCGG GAGCGACAAC CAGGGCATTT 
    CTTGTACAAG GATGAACAGC CTGCCCCGGC TCAAATAATA TTTGCGGTTG 
    GATTTATTTT TTTTCGACAT GAACGGGCAG CCAAGGTTTC ACGATATGAT 
    AGGCGGTGGT GGCAAGGGAA TGCAAGATAA TGAGATCAAT GGCCTCTTCA 
    ACATGCCGTC TTACCATAAG TTTGTGGAGG GCTCCCAGAT GTCTGTTGAC 
    AGCGCCGACG GCTTCAACAT GGCCAACTAC GTTGGGGGTT CCGTTGCCAT 
    GTCGGTGGAC AACAGCAGCG TTGGCTCGAA CGAGTCCCGC ACGGTTATAC 
    TTAAGCACCC AGGCCTCCGT GATGCCCCGA CGGCAAGCTA TTCGGTTGGC 
    AACAGTGTCT TCCGCCCCAA CCGTGTGGCT GCGCACACGC TAAATGAGGA 
    TGCGTTAGCT CGTGTTTTGA TGGATCCGAG CCATCCGACT GAGATCCTAA 
    GTAATTATGA GGAATGGGCC ATTGATTTGG GGAGGTTGGA CATGGGGGTT 
    CCTTTTGCCC AAGGGGCCTT TGGGAAGCTA TACCGGGGAA CATACAATGG 
    AGAAGATGTT GCCATTAAAC TACTGGAGAA GCCTGAGAAT GATCCAGAGA 
    GAGCACAAGC ATTGGAGCAA CAATTTGTGC AAGAAGTTAT GATGTTGTCT 
    AGACTGAGGC ACCCAAACAT TGTGAGGTTT ATAGGTGCAT GTAGGAAGTC 
    AATTGTGTGG TGCATCATTA CTGAGTATGC TAAAGGTGGT TCAGTCCGGC 
    AGTTCCTGGC AAGAAGGCAA AACAAGTCAG TGCCTTTGAG ATTGGCTGTA 
    AAACAGGCAT TGGATATAGC CAGGGGGATG GCCTATGTAC ATGCTTTGGG 
    ATTTATCCAC AGGGATCTGA AGTCAGATAA CCTATTAATT GCCGCAGATA 
    AATCCATTAA GATTGCTGAC TTTGGAGTGG CTCGCATCGA AGTAAAAACT 
    GAGGGTATGA CACCAGAGAC AGGAACCTAC CGCTGGATGG CACCGGAAAT 
    GATCCAGCAC AGGCCTTATG ATCATAAAGT TGATGTATAT AGCTTTGGGA 
    TTGTCTTGTG GGAGCTTATA ACTGGCATGC TCCCATTCAC AAACATGACG 
    GCTGTTCAGG CAGCTTTTGC TGTGGTGAAC AAGGGTGCTC GGCCAGTGAT 
    CCCGCAGGAC TGCCTGCCTG CTCTAAGCCA CATCATGACT CTTTGTTGGG 
    ATGCGAACCC TGAAGTTCGC CCCGCATTTA CTGATATCGT TTGTATGCTT 
    GAGAGTGCAG AGATGGAGAT TCTGAGCAAT GTCCGTAAAG CACGCTTCCG 
    CTGTTGCATC ACTGAGCCCA TGACAACCGA CTGAAATTAA AGCAATGTAG 
    ATGATTACAA CATGGATCGA GGGAGGAAGC AAGGGAGGAT GAAGAAAGAG 
    GCAATCTCAA TGTATTCATT AGTACCAGCT CATAGGGTCT GTGTGCCCAC 
    AGAAGTTCCT AGGCTTTGAG CTTCTGTGTT ATTCGATTCT ATCTTGTGTG 
    AGTTGCACAG CTCAAGTAAC CTCTTCTGGA ATATAGATGT TGCCTTGTAT 
    GTTAACAGGA TCTAATGGAG CTTTCCTATG TTAATAACAT CTGCTTGTTG 
    GTGTAACC

    Gene models with high sequence identity

    1. AT2G24360.1 [+] show detail - Protein kinase superfamily protein
      E-value: 3e-165; Score: 578.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Serine-threonine/tyrosine-protein kinase 1e-67
    HMMPanther Serine/threonine protein kinase-like, ATMRK 9.9e-162
    HMMPanther SERINE-THREONINE PROTEIN KINASE 9.9e-162
    Gene3D no description 3.9e-18
    Gene3D no description 1.9e-55
    HMMSmart Serine/threonine-protein kinase domain 5.7e-57
    HMMSmart Tyrosine-protein kinase, catalytic domain 4.5e-72
    ProfileScan Protein kinase, catalytic domain 42.167
    PatternScan Serine/threonine-protein kinase, active site 0
    superfamily Protein kinase-like domain 6.1e-80
    FPrintScan TYRKINASE 1.8e-17
    FPrintScan TYRKINASE 1.8e-17
    FPrintScan TYRKINASE 1.8e-17
    FPrintScan TYRKINASE 1.8e-17
    FPrintScan TYRKINASE 1.8e-17

    See the detailed result >

    AT2G24360.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G31170.3); Has 132546 Blast hits to 130322 proteins in 4939 species: Archae - 142; Bacteria - 14767; Metazoa - 50018; Fungi - 12226; Plants - 34060; Viruses - 645; Other Eukaryotes - 20688 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR