K09650

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09650

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09650

Determination of introduced cDNA(s)

  • J033034G09 - Rice Full-length cDNAs - Original: J033034G09

    full reading [+] show sequence

    Nucleotide sequence: J033034G09 - full reading
    GAGAGGGGGA GTCGTCGTCT CTGCTCTCCG GTCTCCAGAA AAGCAAAAGG 
    GGAGGCGAAG CCAAGCCAAC CCAACCACAC GCCAATCCAC TCGGAATCCG
    CCTAGGGTTT CCTCCTCTTC CTCTTCCCCT CGCGGCTGCT GCTCGGCGGA
    TTCTGCTGCT GCGGAGGAGG GCGGCGGGGG TTGGGGCTGC AAGCTGGTCC
    GATCAGCTTT TCCTGCTGCT GAGGTAGCGG GAGCGACAAC CAGGGCATTT
    CTTGTACAAG GATGAACAGC CTGCCCCGGC TCAAATAATA TTTGCGGTTG
    GATTTATTTT TTTTCGACAT GAACGGGCAG CCAAGGTTTC ACGATATGAT
    AGGCGGTGGT GGCAAGGGAA TGCAAGATAA TGAGATCAAT GGCCTCTTCA
    ACATGCCGTC TTACCATAAG TTTGTGGAGG GCTCCCAGAT GTCTGTTGAC
    AGCGCCGACG GCTTCAACAT GGCCAACTAC GTTGGGGGTT CCGTTGCCAT
    GTCGGTGGAC AACAGCAGCG TTGGCTCGAA CGAGTCCCGC ACGGTTATAC
    TTAAGCACCC AGGCCTCCGT GATGCCCCGA CGGCAAGCTA TTCGGTTGGC
    AACAGTGTCT TCCGCCCCAA CCGTGTGGCT GCGCACACGC TAAATGAGGA
    TGCGTTAGCT CGTGTTTTGA TGGATCCGAG CCATCCGACT GAGATCCTAA
    GTAATTATGA GGAATGGGCC ATTGATTTGG GGAGGTTGGA CATGGGGGTT
    CCTTTTGCCC AAGGGGCCTT TGGGAAGCTA TACCGGGGAA CATACAATGG
    AGAAGATGTT GCCATTAAAC TACTGGAGAA GCCTGAGAAT GATCCAGAGA
    GAGCACAAGC ATTGGAGCAA CAATTTGTGC AAGAAGTTAT GATGTTGTCT
    AGACTGAGGC ACCCAAACAT TGTGAGGTTT ATAGGTGCAT GTAGGAAGTC
    AATTGTGTGG TGCATCATTA CTGAGTATGC TAAAGGTGGT TCAGTCCGGC
    AGTTCCTGGC AAGAAGGCAA AACAAGTCAG TGCCTTTGAG ATTGGCTGTA
    AAACAGGCAT TGGATATAGC CAGGGGGATG GCCTATGTAC ATGCTTTGGG
    ATTTATCCAC AGGGATCTGA AGTCAGATAA CCTATTAATT GCCGCAGATA
    AATCCATTAA GATTGCTGAC TTTGGAGTGG CTCGCATCGA AGTAAAAACT
    GAGGGTATGA CACCAGAGAC AGGAACCTAC CGCTGGATGG CACCGGAAAT
    GATCCAGCAC AGGCCTTATG ATCATAAAGT TGATGTATAT AGCTTTGGGA
    TTGTCTTGTG GGAGCTTATA ACTGGCATGC TCCCATTCAC AAACATGACG
    GCTGTTCAGG CAGCTTTTGC TGTGGTGAAC AAGGGTGCTC GGCCAGTGAT
    CCCGCAGGAC TGCCTGCCTG CTCTAAGCCA CATCATGACT CTTTGTTGGG
    ATGCGAACCC TGAAGTTCGC CCCGCATTTA CTGATATCGT TTGTATGCTT
    GAGAGTGCAG AGATGGAGAT TCTGAGCAAT GTCCGTAAAG CACGCTTCCG
    CTGTTGCATC ACTGAGCCCA TGACAACCGA CTGAAATTAA AGCAATGTAG
    ATGATTACAA CATGGATCGA GGGAGGAAGC AAGGGAGGAT GAAGAAAGAG
    GCAATCTCAA TGTATTCATT AGTACCAGCT CATAGGGTCT GTGTGCCCAC
    AGAAGTTCCT AGGCTTTGAG CTTCTGTGTT ATTCGATTCT ATCTTGTGTG
    AGTTGCACAG CTCAAGTAAC CTCTTCTGGA ATATAGATGT TGCCTTGTAT
    GTTAACAGGA TCTAATGGAG CTTTCCTATG TTAATAACAT CTGCTTGTTG
    GTGTAACC

    Gene models with high sequence identity

    1. AT2G24360.1 [+] show detail - Protein kinase superfamily protein
      E-value: 3e-165; Score: 578.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Serine-threonine/tyrosine-protein kinase 1e-67
    HMMPanther Serine/threonine protein kinase-like, ATMRK 9.9e-162
    HMMPanther SERINE-THREONINE PROTEIN KINASE 9.9e-162
    Gene3D no description 3.9e-18
    Gene3D no description 1.9e-55
    HMMSmart Serine/threonine-protein kinase domain 5.7e-57
    HMMSmart Tyrosine-protein kinase, catalytic domain 4.5e-72
    ProfileScan Protein kinase, catalytic domain 42.167
    PatternScan Serine/threonine-protein kinase, active site 0
    superfamily Protein kinase-like domain 6.1e-80
    FPrintScan TYRKINASE 1.8e-17
    FPrintScan TYRKINASE 1.8e-17
    FPrintScan TYRKINASE 1.8e-17
    FPrintScan TYRKINASE 1.8e-17
    FPrintScan TYRKINASE 1.8e-17

    See the detailed result >

    AT2G24360.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G31170.3); Has 132546 Blast hits to 130322 proteins in 4939 species: Archae - 142; Bacteria - 14767; Metazoa - 50018; Fungi - 12226; Plants - 34060; Viruses - 645; Other Eukaryotes - 20688 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR