K09742

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09742

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09742

Determination of introduced cDNA(s)

J023030E05 - Rice Full-length cDNAs - Original: J023030E05

full reading [+] show sequence

GAGGAGTAAA TCAATCAGTG GGAGAGGATT AAGATGATGA TGATCTGTCT 
CTTAGGCCTC CATCACGCCC GTTAATTCCC TTTCAGGCTG GTCTTCGCCT 
ACCTGTTGCT GCTGCTCCTC CATCAAATAC CCCCATTCCC TCTCCTCTCT 
GCTACTACTA TACCTCCTTC TTGTTCCTTT CTTCAGACAA AGGCTTTGCC 
TTTCCTTCCT CTTCCACCAT CCTGCCACAA GAAGCAAGAA CCTCTCTTAA 
TTTGAGCAAG AAACCATTCG TCACATCAAC GGAGGAAGCA GCTATAGTTT 
GATTGATTGG TTGATCGATC GATGCTGGGC GGCGGCAAGA TGAAGGGTGG 
GGAGACGATG GGCGGCGGCG GCGGCAGCGG CAGCAGCAGC ATTAGCCCGC 
TGGTGTCGTT CGTGCTGGGC GCCGCCATGG CCACCGTCTG CATCCTCTTC 
GTCATGTCCG CCAGCCCGGG ACGCCGCCTC GCTGACATCT CCGCCTGGAG 
CAACGCCGAC GACTCGCCGC CGCTGCCGCT CCCGTTGCAG GACGCCGCCG 
TCGACTCCAA CGACTCGCTG GCCGCCGCCG CCGCCGCCAA CGTCACCGTC 
GTTGCTGCTC CGGCTCCCGC CCCCGTCCAG GCTCCGGCGC CGGCGTCCCC 
TTACGGCGAC CTGGAGGAGG TGCTCCGGCG AGCGGCGACC AAGGACAGGA 
CGGTGATCAT GACGCAGATC AACCTGGCGT GGACGAAGCC GGGGTCGCTG 
CTGGACCTCT TCTTCGAGAG CTTCAGGCTC GGGGAGGGCG GCGTGTCGCG 
GCTGCTGGAC CACCTGGTGA TCGTCACCAT GGACCCCGCG GCGTACGAGG 
GGTGCCAGGC GGTGCACCGC CATTGCTACT TCCTCCGCAC CACCGGCGTC 
GACTACCGCT CCGAAGATGT TCATGAGCAA GGACTACCTC GAGATGATGT 
GGGGTCGCAA CAAGTTTCAG CAGACCATCC TTGAGCTCGG CTACAACTTC 
CTCTTCACGG ATGTGGACGT GATGTGGTTC AGGGACCCGT TCAGGCACAT 
ATCAATGGG

Gene models with high sequence identity

AT2G02061.1 [+] show detail - Nucleotide-diphospho-sugar transferase family protein
E-value: 1e-37; Score: 65.10

InterPro Scan Digest

Program	Description	E-value
HMMPanther	REGULATORY PROTEIN	1.1e-19
HMMPanther	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	1.1e-19
HMMPanther	REGULATORY PROTEIN	3e-26
HMMPanther	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	3e-26
HMMPfam	Nucleotid_trans	0.00021
HMMPfam	Nucleotid_trans	1.3e-18

See the detailed result >

AT2G02061.1

Model type: Protein coding
Short Description: Nucleotide-diphospho-sugar transferase family protein
Computational Description: Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G14590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR