K09826

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09826

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • desaturated green (PATO:0001272)
    (Rosette leaf::Color::pale)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Shape::zigzag)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09826

Determination of introduced cDNA(s)

  • J033077F21 - Rice Full-length cDNAs - Original: J033077F21

    full reading [+] show sequence

    Nucleotide sequence: J033077F21 - full reading 
    GTTGGGTTGT CGCATTTGCA GACGTTAGGG GTGGTGGGGA TTCATCATGG 
    CATCTTGCAG GCACCAAAGC TAACAAGATA AATTCTATCA AAGATTTTGC 
    TGCATGTGGT ACACATCTCA TCAAGGAAGG ATTTGTTCAC AAAAATAGAC 
    TTTGTGCTAT AGGTTGCAGT GCTGGTGGCC TGTTGGTTGG TGCAGTCATC 
    AATATGCTGC CGGATTTATT TTCTGCTGCA GTTCTAAAGG TCCCTTTTCT 
    TGATATCTGC AATACAATGA TGGATTCTAC TTTGCCTCTA ACCATCTTGG 
    ATTATGAAGA ATTTGGTGAC CCTAATATCT CCACTGAATT TGATACTATT 
    CGTAGTTATT CTCCTTATGA CAATTTATCT CCTGACATAT GCTACCCACC 
    GGTTCTGGTA ACTGCCTCAT TTAATGATAC AAGGGTAGGA GTCTGGGAAG 
    CTGCTAAATG GGTTTCAAAA GTGAGAGATA TTACATGCCA ATCCTGTTCC 
    TGGTCTGTCA TTCTCAAAAC TAATATGCAA AGTGGTCATT TTGGTGAGGG 
    TGGACGCTTC ATGCATTGCG ATGAGACAGC TTTTGAGTAT GCATTTCTCA 
    TGAAAGCCTT GGGGTTGGAT GACAATGACA GCTGCAAAAT AGTGTGATAG 
    TTTTCAGGGC TTTCTACGCT TCAATGTTTT GTGCAAGTGT GACATATGAC 
    TGCAGAAACT GATTACATTG TGGGTAGCAC GTGTTTTTCT TAAGACAGGA 
    GATCAACTGC TCCGCTATCA AAGGTCAGTA GCCTGCACTA TCTGCGGTAG 
    TAGCATCAAT AAAATGTTAC TACAGCGGTT GAAAATATCT GGTATCTTGT 
    ATTCTGATTA TCTAGCCTTT CTCACAATAA ATGTTATGCT AAAGCACTAT 
    TGGTTACATC AAATTGATTT CTTCGAAGGA GATCCATCAC CAATTCATGA 
    TGAATTATGA CCAAGTTGAC CTTCCAACAT GATAGGTGAT GTTGATGGTG 
    CTAAATACAG AGCTACTTGA GCCCCCGCAA AAAAGTAGAG AGTGGATGTC 
    ACTTTTGACT TCTGCATGAT ATATCAGGCT ATTGTCTGTT CCTTTCTTAT 
    TTTTTGCTCA TCTGAATGAA ACCATCTTTT AACAAGCTTC CTTGAGGCGT 
    CATCAGATTG CATGTAACAC TCATATGTAC ATTTTGTGAT GTAGTCCATA 
    TCTGCGAGAT ACACATGGCC TATCCAGCTA CTTCATATGA CTTGTT

    Gene models with high sequence identity

    1. AT1G69020.1 [+] show detail - Prolyl oligopeptidase family protein
      E-value: 2e-73; Score: 273.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Peptidase_S9 6.4e-49
    FPrintScan Peptidase S9A, prolyl oligopeptidase 9.4e-28
    FPrintScan Peptidase S9A, prolyl oligopeptidase 9.4e-28
    FPrintScan Peptidase S9A, prolyl oligopeptidase 9.4e-28
    FPrintScan Peptidase S9A, prolyl oligopeptidase 9.4e-28
    HMMPanther OLIGOPEPTIDASE B (LYSYL AND ARGININYL OLIGOPE 9.7e-103
    HMMPanther Peptidase S9A, prolyl oligopeptidase 9.7e-103
    superfamily alpha/beta-Hydrolases 6.1e-42
    Gene3D no description 2e-54

    See the detailed result >

    AT1G69020.1

    Model type
    Protein coding
    Short Description
    Prolyl oligopeptidase family protein
    Computational Description
    Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT5G66960.1); Has 6703 Blast hits to 6563 proteins in 1132 species: Archae - 51; Bacteria - 2817; Metazoa - 295; Fungi - 25; Plants - 196; Viruses - 0; Other Eukaryotes - 3319 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR