K09831

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09831

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09831

Determination of introduced cDNA(s)

J013168E03 - Rice Full-length cDNAs - Original: J013168E03

full reading [+] show sequence

GATGTTCCTT CTTCATCAGA CTATTGGCTC CGATGCTAGC CTATGGAGAA 
AACTATGCAG CCCCTCCATT TTTCCAACAA GAACCACAAA AACAGATTTC 
ACATGACTTA CCTTGGCCAT GCTCTTGTGC TGCTGCTCTT CTTGGCCTCT 
CCCACCAGTT CTTGCACCGA GCAAGAGAGG AACTCACTCA TCCAGTTTCT 
CACTGGGCTC TCGAAGGATG GTGGCCTGGG CATGTCATGG AAGAATGGCA 
CGGACTGCTG CGCATGGGAA GGGATCACCT GCAACCCAAA CAGGATGGTT 
ACTGATGTGT TTCTGGCTTC TAGAGGCCTT GAAGGGGTCA TCTCACCTTC 
CCTTGGCAAT CTCACAGGTC TGATGCGCCT CAACTTGTCC CACAACTTGC 
TGTCCGGTGG CTTACCGCTG GAACTGGTGT CATCAAGCAG CATCGTGGTC 
CTTGATGTCA GTTTTAACTA CATGACAGGA GGCATGAGTG ACCTGCCATC 
TTCAACCCCT GACCGGCCTC TGCAGGTACT GAACATATCA AGCAACTTGT 
TTACAGGAAT TTTTCCATCA ACCACATGGC AGGTGATGAA GAGTCTTGTC 
GCGATCAATG CCAGCACCAA CAGCTTTACT GGGAATATAC CAACTTCGTT 
CTGTGTCAGT GCACCATCCT TTGCTTTGCT TGAACTTAGT AATAACCAAT 
TCAGTGGAGG CATCCCTCCA GGGCTTGGTA ATTGCTCCAA GTTGACATTC 
CTCAGCACTG GCAGAAACAA TCTCAGTGGG ACCCTTCCAT ATGAGCTCTT 
CAATATTACC TCTTTGAAGC ACCTTTCTTT TCCTAACAAT CAGTTAGAAG 
GATCAATTGA GGGCATCATG AAGCTCATAA ATCTGGTCAC CCTTGATCTC 
GGAGGAAATA AGCTCATTGG TAGCATTCCA GATTCCATAG GACAGCTGAA 
AAGACTGGAG AAGCTCCATC TGGACAACAA CAACATGTCC GGGGAGCTGC 
CATGGACTTT GAGTGACTGC ACAAACCTTG TAACCATCGA CCTCAAGAGC 
AACAGCTTCA GCGGGAAGCT CACCAATGTC AACTTCTCCA CACTGCCCAA 
TCTGAAAACT TTAGATGTCG TTTGGAACAA TTTTTCTGGA ACAGTTCCAG 
AAAGCATCTA CTCATGCAGA AATCTAACTG CATTACGGCT GTCTTACAAT 
GGGTTCCATG GCCAGTTGTC AGAGAGAATA GGAAATCTGC AGTACCTCTC 
TTTTCTATCA ATTGTTAATA TCTCTCTTAC AAATATCACA AGGACAATTC 
AGGTACTTCA GAGTTGCAGG AACCTCACCT CCTTACTCAT TGGTCGCAAC 
TTCAAGCAAG AAACAATGCC AGAGGGTGAT ATAATTGATG GTTTTGAGAA 
TCTTCAGGTC CTTTCCCTGG CCAATTGTAT GTTGTCTGGA AGAATACCTC 
ATTGGTTATC AAAGCTCAAA AATTTGGCGG TGTTATTTTT ATATAATAAT 
CAATTTACTG GACAGATACC CGACTGGATC AGCAGTCTAA ACTTCCTCTT 
CTATCTAGAT TTATCGAGCA ACAGCCTTTC CGGAGAAATT CCAAAAGCCT 
TAATGGAGAT GCCAATGTTC AAAACAGATA ATGTTGAACC AAGGGTCTTT 
GAGTTGCCTG TTTTTACAGC TCCATTACTT CAATACCGAA GAACCAGTGC 
TCTCCCAAAA GTGCTGAATC TAGGTATCAA TAACTTCACT GGTGTCATCC 
CGAAGGAGAT TGGTCAGTTA AAGGCACTTC TTTTACTCAA TTTGAGCTCC 
AACAAATTCT CTGGAGGGAT ACCAGAATCA ATCTGCAACA TCACAAACCT 
GCAGGTGCTT GACATATCAA GCAATGACCT CACTGGTCCA ATCCCTGCAG 
CATTGAACAA ACTGAACTTC CTTTCAGCAT TTAATGTATC TAACAATGAC 
CTAGAAGGAT CAGTTCCAAC TGTAGGCCAA CTTAGCACGT TTCCGAATTC 
TAGCTTTGAT GGCAATCCAA AATTGTGTGG TCCTATGCTT GTACACCATT 
GTGGTTCAGA TAAAACATCG TATGTCTCCA AAAAGCGACA TAACAAGACA 
GCCATCTTAG CACTTGCATT TGGTGTATTT TTTGGAGGTA TCACCATCCT 
GTTCTTGCTA GCTCGTCTTA TTCTCTTCTT GAGGGGCAAG AATTTCGTGA 
CTGAGAACAG GAGATGCAGA AACGATGGCA CCGAAGAAAC ATTGTCCAAC 
ATCAAGTCGG AGCAAACCTT GGTGATGCTG TCACAAGGAA AGGGAGAGCA 
AACCAAGCTC ACATTCACTG ATCTGAAGGC TACAAAAAAC TTTGACAAGG 
AGAACATCAT CGGTTGTGGA GGATATGGGC TAGTCTACAA AGCTGAGTTA 
TCTGATGGAT CGATGGTTGC CATAAAGAAG CTCAACAGCG ACATGTGTCT 
GATGGAGAGG GAATTCAGTG CAGAGGTTGA CGCACTCTCT ACAGCGCAGC 
ATGACAATCT TGTGCCGCTG TGGGGTTACT GCATCCAGGG AAACTCAATG 
TTGCTCATAT ATTCCTACAT GGAGAATGGC AGCCTGGATG ATTGGCTTCA 
TAACAGGAAT GATGATGCCA GCTCGTTTCT TAACTGGCCA ATGCGGCTCA 
AGATTGCACA AGGAGCAAGC CAGGGTATAT CTTACATCCA TGATGTCTGC 
AAGCCTCAAA TAGTCCACCG TGACATCAAG TGCAGCAATG TTTTACTTGA 
CAAAGAATTC AAAGCTCACA TTGCAGATTT TGGGCTATCA AGGTTGATCC 
TTCCCAACAG AACCCATGTC ACAACAGAGC TAGTCGGCAC TTTCGGTTAC 
ATCCCCCCAG AGTATGGACA AGGGTGGGTG GCTACATTGA GAGGTGACAT 
GTACAGCTTT GGAGTAGTCC TGCTCGAGCT GCTCACCGGA AGGCGGCCTG 
TTCCAATCTT GTCTTCATCA AAACAACTTG TCGAGTGGGT GCAGGAGATG 
ATATCTGAAG GAAAGTATAT TGAGGTCCTG GATCCAACAC TCCGAGGCAC 
AGGATATGAA AAACAGATGG TGAAGGTTCT TGAAGTTGCA TGCCAGTGTG 
TAAATCATAA TCCTGGAATG AGACCAACTA TACAAGAGGT TGTCTCCTGC 
CTGGACATCA TAGGCACCGA GCTGCAGACA ACAAAACTCA ATTAAAATAG 
AATTAGATAA CACATGATGA TCTACTTTAG AGTGCAGAGA GAAGCTGAGT 
GTTGCACTGT ACTTTGCACA GTCTCTCATG AATTATCTTT TTTTACTATT 
TTGTAATTCA AACCCATTTT TTCCCTTCTT GTAACTATTC TGTAGTTAGA 
ATTCGATAAA CAACACGAAG ATTCACAACA TTATCGAGAG CCC

Gene models with high sequence identity

AT1G72300.1 [+] show detail - Leucine-rich receptor-like protein kinase family protein
E-value: 0; Score: 799.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	4.6e-56
Gene3D	no description	2e-14
Gene3D	no description	1.1e-50
Gene3D	no description	3.8e-19
Gene3D	no description	5.7e-50
ProfileScan	Protein kinase, catalytic domain	38.252
PatternScan	Protein kinase, ATP binding site	0
PatternScan	Serine/threonine-protein kinase, active site	0
HMMPfam	Serine/threonine-protein kinase-like domain	1.6e-43
HMMPfam	Leucine-rich repeat	0.21
HMMPfam	Leucine-rich repeat	0.37
HMMPfam	Leucine-rich repeat	0.21
HMMPfam	Leucine-rich repeat-containing N-terminal domain, type 2	1e-07
HMMSmart	Leucine-rich repeat, typical subtype	250
HMMSmart	Leucine-rich repeat, typical subtype	10
HMMSmart	Leucine-rich repeat, typical subtype	54
HMMSmart	Leucine-rich repeat, typical subtype	69
HMMSmart	Leucine-rich repeat, typical subtype	250
HMMSmart	Serine/threonine-protein kinase domain	1.6e-35
HMMSmart	Tyrosine-protein kinase, catalytic domain	1.4e-23
HMMPanther	RECEPTOR PROTEIN KINASE-RELATED	1.5e-197
HMMPanther	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	1.5e-197
superfamily	Protein kinase-like domain	2.8e-80
superfamily	L domain-like	4.9e-55
superfamily	RNI-like	1.1e-50

See the detailed result >

AT1G72300.1

Model type: Protein coding
Short Description: Leucine-rich receptor-like protein kinase family protein
Curator Summary: Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion.
Computational Description: Leucine-rich receptor-like protein kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor like protein 2 (TAIR:AT1G17240.1); Has 184889 Blast hits to 127916 proteins in 4307 species: Archae - 126; Bacteria - 18793; Metazoa - 54455; Fungi - 9661; Plants - 78637; Viruses - 498; Other Eukaryotes - 22719 (source: NCBI BLink).
Link: InterPro Scan - TAIR