K09836

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09836

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09836

Determination of introduced cDNA(s)

  • J023058P10 - Rice Full-length cDNAs - Original: J023058P10

    full reading [+] show sequence

    Nucleotide sequence: J023058P10 - full reading 
    GGCACGGCCT AGCTACCCAC CCCCCACCCT ACCTCTCCTC CGCCACCCGT 
    CGCCGGCCGG CATCTCGCTC GGAGCCAGCG CGCCGCGGCG GCCGGAGCCC 
    GGAGGGACAA CGCAACGATC TCTCTCTAGC TAGAGCTAGA GCTATAGCTT 
    AGCTCAGCTA ATTATAATAC ATAGCTAGGA AGAATTAACA ATTAATGGGG 
    AAGCGCAGTG CGCCCCGGTA CCCCGACGAC GGCGGCGGCG GCGGCGGCGG 
    GATTTGCTGC GTGCTGTGCT GGTGCTGCTG CTTCCTGTTC CTGATCGTCG 
    CGGCGCTCGC CGGCGCGGCG GCGTACGCCC TGTTCCTGTA CAAGCCCAAG 
    GCGCCGTCCT ACTCGGTGAG CAACATGTCG GTGTCGCAGT TCGACTTCAA 
    CTCCAACGAC CTGACGCTCT ACACCAAGCT GGTGGCCACC GTGCGGGCCG 
    AGAACCCCAA CGAGATGATC GGCATCATCT ACGGCGACGG CTCCCGAACG 
    GTCGTCTCCT ACCGCGGCAC GCCGCTGTGC TCCGGCCACC TCCCCACCTT 
    CTACCAGGGG TTCAAGAACG TGACGGTGAT GGAGATCTCC ATGGAAGGGA 
    GGCACGGCTT CGGGTCGGGG CTGCAGAGCG CGCTGGAGGA GAGCGAGAAG 
    GAAGGGAACG TGCCGCTCGA CGTGTTCGTC AGCGTGCCCG TGTCGCTGCG 
    GTTCGGCTCG TTCGACGTCC GGGAGGTGAG GGTCAACGTG CACTGCGCGC 
    TCGTCGTCGA CAGCATCTCA CCCAAGAAGA AGCCCACCAT CAAGTCCGCC 
    ACCTACCAGG GCAACGTAGA GTTCTGATCC ATTGCATGCA TCGAACATCA 
    ATGCCTTCAT TAATTTCATT TAATTGTTTG TTTTAATTTG TTATTAACTT 
    TGCTGTTCAG TGGAGTTGGG GAGAAAGTAT GTTTGTGATG TAAACACTGT 
    AGTAAGAAAT GGTTCCAAAC TAAAATTCCT TTGGTTGAAG TTATATGCAG 
    AATGCAGAGA CATCTTTTGA TC

    Gene models with high sequence identity

    1. AT1G65690.1 [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
      E-value: 3e-26; Score: 116.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G65690.1

    Model type
    Protein coding
    Short Description
    Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
    Computational Description
    Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 25 (TAIR:AT5G36970.1); Has 985 Blast hits to 984 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 985; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR