K09947

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09947

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09947

Determination of introduced cDNA(s)

  • J033024C12 - Rice Full-length cDNAs - Original: J033024C12

    full reading [+] show sequence

    Nucleotide sequence: J033024C12 - full reading 
    TAATTGTGCT TATTTCTTTT AACCTTCCAT AGGAAGCCAA AGGCACTGGG 
    GCTGGATTGA TGGCAGCAGC TATTTTGGCA ATGGTTCCCT CATACATCTC 
    AAGATCCGTT GCAGGAAGCT ATGATAATGA AGCCGTAGCA ATATTTGCTT 
    TGATATTCAC ATTTTATCTA TATGTAAAGA CACTGAACAC AGGATCACTC 
    TTTTATGCAA CGCTCAATGC TCTCTCATAT TTCTACATGG TCTGTTCTTG 
    GGGAGGTTAC ACATTCATCA TCAACCTTAT TCCAATTCAT GTACTGTTGT 
    GCATTGTCAC TGGTCGTTAT TCTTCACGGC TTTACATTGC TTATGCTCCC 
    CTTGTTATAC TGGGAACACT TCTGGCAGCC TTAGTACCCG TGGTTGGTTT 
    TAATGCAGTG ATGACGTCTG AGCACTTTGC ATCATTTCTG GTGTTCATAA 
    TCCTTCATGT GGTTGCTCTT GTGTATTACA TAAAAGGACT TCTAACTCCC 
    AGGCTGTTCA AAGTAGCTAT GACTCTTGTC ATAACAGTTG GCTTGGCTGT 
    TTGTTTTGCA GTAATAGCTA TACTCATCGC TTTGGTGGCA TCTAGCCCCA 
    CAAAAGGATG GAGTGGGCGC AGTTTGAGTC TACTTGATCC AACCTATGCA 
    AGCAAGTACA TCCCTATTAT TGCTAGTGTC AGCGAACATC AACCCCCTAC 
    CTGGCCCTCC TATTTCATGG ATATCAACGT GTTGGCCTTC TTGATTCCTG 
    CTGGGATCAT TTCATGCTTC TTGCCTTTAT CTGATGCAAG CTCCTTCGTG 
    GTCTTGTACT TGGTCACCGC AGTATATTTT TCTGGAGTAA TGGTGCGGCT 
    TATGCTTGTC CTTGCTCCTG CTGCGTGCAT TTTATCTGGA ATCGCTCTTT 
    CTGAGGCTTT CGACGTCCTC ACAAGATCCG TTAAATATCA GCTATCAAAA 
    TTATTTGATG ACAGCCCTGC TGCTTCAGGG GATAGTAGTG CAGAGAGTTC 
    TAGCGCTAGT ACTGTCTCCA CAAATTCAAA AAAATGAGAC TAGACCTGAA 
    AAAACTGAAA CAGCCCCAAA GGAAAAACCA TCAAAGAAAA ACCGGAAGAA 
    GGAAAAGGAA GTGGCTGAAA GTGTTCCTGT AAAGCCTAAA AAGGAAAAGA 
    AGCTTTTGGT ACTTCCTATG GAGGCATCTG TTTTGGGCAT TTTGTTGCTG 
    ATCGTGTTAG GTGGTTTCTA TGTGGTCCAT TGTGTGTGGG CAGCAGCTGA 
    GGCGTACTCA GCTCCTTCAA TTGTGTTGAC TTCTCGTTCG CGTGATGGAT 
    TGCATGTTTT TGATGATTTC CGTGAAGCCT ATGCATGGCT CAGCCATAAC 
    ACAGATGTTG ATGACAAGGT TGCGTCCTGG TGGGATTATG GTTATCAAAC 
    AACTGCAATG GCCAACAGGA CTGTAATTGT AGACAATAAT ACTTGGAATA 
    ATACCCACAT AGCAACAGTT GGAACAGCGA TGTCATCTCC AGAAAAAGCA 
    GCTTGGGAGA TCTTCAATTC TTTAGATGTC AAATATGTCC TTGTTGTATT 
    TGGAGGTCTT GTTGGCTACC CTAGCGATGA TATTAACAAG TTCCTTTGGA 
    TGGTTCGCAT AGGAGGTGGT GTATTCCCTC ACATCAAGGA ACCTGATTAT 
    CTTAGGGATG GTAACTATCG TGTTGATGCT CAAGGCACCC CAACTATGCT 
    GAATTGCCTC ATGTACAAGC TTTGCTATTA CAGGTTTGAC AAACAGAATT 
    CAATAGATAA CGTTTAGTTG TCATCAATAT TTTTTTTTTT ACATTTGGCT 
    GTTTTCCTTG TTTCCTCCAG GTTCGTTGAG ACCGATGGCA AAGGTTTTGA 
    TAGAGTAAGA GGATATGAAA TAGGAAAGAA GCATTTCAAA CTAACACATT 
    TTGAGGAGGT TTTCACAACC CACCACTGGA TGGTCCGTAT ATATAAACTG 
    AAACCTCAAA AGAATAGGGT TCGGGGCAAG TTGAAGAAGT TGAAATCTGG 
    CTCCAAAGCT AGCTCAACGA ATGCGGCGGG CCGAAAGAAG AACCCATGGC 
    AATAAAAATG AGTAAATGCG AAAAGCGACG TGGCTGCTTG GAATTTGCTT 
    TTGCTAGCTC AACTGCAACT AAGCTCAAAA GAACTAGAAA ACCACAGGCC 
    TAGGATTAGA GATTGCTGCG TTATTGCACT CAGTATTTGA CACCCCTAAT 
    ATGTTTTTGG GACCAGCAGG AGTGCTGAAG AAATTTTTGA TAGACTGCTC 
    TAAGCTTTTT GGCCCCATTG TTTGCAACAC GCGGTTTAGT GTCTTTTATA 
    CTCCTTTTGC ACTGAAGATG TTTAGGCGGA CGTACAATGG AAGTTTATTT

    Gene models with high sequence identity

    1. AT5G19690.1 [+] show detail - staurosporin and temperature sensitive 3-like A
      E-value: 2e-139; Score: 493.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther 60S RIBOSOMAL PROTEIN L35 6.5e-97
    HMMPanther 60S RIBOSOMAL PROTEIN L35 1.2e-117
    HMMPanther 60S RIBOSOMAL PROTEIN L35 5.5e-16
    HMMPfam Oligosaccharyl transferase, STT3 subunit 1.1e-34
    HMMPfam Oligosaccharyl transferase, STT3 subunit 1.7e-56

    See the detailed result >

    AT5G19690.1

    Model type
    Protein coding
    Short Description
    staurosporin and temperature sensitive 3-like A
    Curator Summary
    encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions
    Computational Description
    staurosporin and temperature sensitive 3-like A (STT3A); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: response to salt stress; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like b (TAIR:AT1G34130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR