K10037

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10037

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10037

Determination of introduced cDNA(s)

  • J033094L01 - Rice Full-length cDNAs - Original: J033094L01

    full reading [+] show sequence

    Nucleotide sequence: J033094L01 - full reading 
    GTTATTGCCC ACCAAGAATT CAAGAAAGGC AAGAGCAGAG GTGAGCAGCG 
    ATCCTCCAAT GGCGGCTGCA AGGAGAGTGG TCTTGTTCCC CAGCCTCGGC 
    GTGGGCCATC TCGCCCCCAT GCTGGAGCTC GCCGCGGTTT GCATCCGCCA 
    CGGCCTCGCC GTCACGGTCG CCGTCCCTGA CCCGGCCACC ACCGCCCCCG 
    CCTTCTCCGC CGCGCTCCGC AAGTACGCAT CCCGCCTCCC CTCCCTCTCC 
    GTCCATCCAC TCCCTCCTCC TCCTCATCCT CCTGCCTCCT CCGGCGCCGA 
    TGCCGCCGCT CACCCGCTCC TCCGTATGCT CGCCGTCCTC CGCGCCCACG 
    CGCCCGCCCT CGGGGACCTG CTGCGTGGCC CCCATGCCGC TCGGGCGCTC 
    GTGGCCGACA TGTTCTCCGT CTACGCCCTC GACGTCGCCG CCGAGCTCGG 
    CGTCCCCGGG TACCTCCTCT TCTGCACCGG CGCCACCAAC CTCGCCGTTT 
    TCCTCCGTTT GCCACGGTTT TGCGCCGGGA GCAGCGGAAG CTTGAGGGAG 
    CTCGGCGACG CGCCCGTGTC GTTCCCCGGC GTGCGCCCGC TGCCGGCGTC 
    GCACTTGCCC GAGGAGGTGC TCGACCGTGG GACGGACATA AGCGCGGCCA 
    TGCTGGACGC GTTCGACCGG ATGGCGGACG CGCGCGGCAT TCTGGTGAAC 
    ACCTTCGACG CGCTGGAGGG TCCCGGGGTG GCGGCGCTGA GGGACGGCCG 
    CTGCCTCTCC AACCGCGCCA CGCCGCCGGT CTACTGCGTC GGGCCATTGA 
    TCACCGACGG CGGCGCGGAG GAGGAGAGGC ACCCGTGCCT CGCTTGGCTG 
    GACGCGCAGC CGGAGCGCAG CGTCGTGTTC CTCTGCTTCG GGAGCCGCGG 
    CGCGCTCTCG CCGGAGCAGG TCAGCGAGAT GGCCACGGGC CTCGAGAGGT 
    CCGAGCAGAG ATTCTTGTGG GCGCTGCGCG CGCCCGCGGG CACGAAGCCG 
    GACGCCGCGA TGTCTCTTCT TCCTGACGGA TTCTTGGCGC GGACAGCCGA 
    CAGAGGCGTC GTGGTGACCG CGTCCTGGGT GCCGCAGGTG GCGGTGCTGC 
    AGCACGCATC CACGGGCGCA TTCGTGACGC ACTGTGGATG GAACTCGACG 
    CTGGAGGCTG TCGCAGCCGG CGTTCCAATG GTGTGCTGGC CGCTCGACGC 
    GGAGCAGTGG ATGAACAAGG TGTTCATCGT GGAGGAGATG AAGATTGGCA 
    TCGAGGTCAG AGGGTATAAA CCCGGGGCAC TTGTCCAGGC CGACATCGTC 
    GATGCCATCT TGAGGCGGAT CATGGAATCG GATGCGCAGC AGGGAGTCCT 
    GGAGCGGGTC ATGGCGATGA AGGAGAGCGC AGCGGCAGCA TGGAAGGAAG 
    GGGGATCATC GTGCACTGCA TTCGCTGAAT TTCTCAAGGA CATGGAGGAG 
    GGGAATGTTG CCATGGCGCA TTCCAATCAG GTTGAAACTT GAATTTCTTC 
    CTGAGCATGG CTCTTGACCT TTGCATTTGT CTTCCATCAA TTAGGATCCA 
    TAGAAAATTG TCCAAACCCA TCTGCAAGCA CCACAGTTGG TCAAATGCTT 
    GTTTATGATA AGCTTAAGTT CAAATGAAAT TCACTGACCA CAAATATGTG 
    ATGACAGGTC TCTTACTTGT TAGAAATTCA AGCTTTTCAA TTTCGTAGTT 
    CGTAGTGGTC TGGTCAATTA TACATGGTGC TTCATTGCTG TTGAACAGTT 
    GGGGAGGCCT CCAAGATAAT TTCCCATTAA GGCCTTGTTC TTCGGTTAAT 
    CCCCATAATA TGGGTATAAT ATGTACATAA GAGCAAGGAT AATGGTGAGC 
    TATAAGCAAG CTAAATGCTT ATGTGGAAGA GAGAGATAAA TAAAAGTGGA 
    GAGTGTTGGC TCTCATGC

    Gene models with high sequence identity

    1. AT3G16520.3 [+] show detail - UDP-glucosyl transferase 88A1
      E-value: 4e-73; Score: 273.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 2.7e-52
    Gene3D no description 0.00000000000003
    HMMPanther UDP-GLUCOSYLTRANSFERASE 4.2e-112
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 4.2e-112
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 8.1e-30
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0

    See the detailed result >

    AT3G16520.3

    Model type
    Protein coding
    Short Description
    UDP-glucosyl transferase 88A1
    Computational Description
    UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7523 Blast hits to 7470 proteins in 455 species: Archae - 0; Bacteria - 255; Metazoa - 2062; Fungi - 26; Plants - 5000; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR