K10050

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10050

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10050

Determination of introduced cDNA(s)

  • J033070C22 - Rice Full-length cDNAs - Original: J033070C22

    full reading [+] show sequence

    Nucleotide sequence: J033070C22 - full reading 
    GGGTGGGTCA AAACAAACAC ACACACACAC ATCTGTCTCT TCTTCAGGTT 
    TCAGGTCTCC TGGCTGCTTT GCTTCTGCTG CCTCTGTGTG GGGCTCCAGC 
    CTTGCTCAGA TTGATGATTG GTGATCCAAC CATCTTCATC ACTTACAGAG 
    ATGGGGTGTG GTGCATCAAT CCCTAAGAAA TGCAAGGTAG GAGGGAAGGG 
    GAAGAAGCGC CGGAGCGTCA TACAGGAGGT TGCCATATTC GTGCCGACAA 
    TTCGCATTCC GGTGGACAGT GATGTTGCCC ATCCACTCAG AGGACTAGTA 
    TCCAAGGAGC TCGTCGACCG CCTCTCAAAG TTCAGAGACC GCGTTGTCGC 
    GCTCTCTGAA GATATCTATT GCGCGGATGT TTCGGATGTT TCAGAGTTAC 
    AGCATGCCCT TGAGGAGTAC TTGCCAGTTG TTCTTGGTTT AACAATGAAA 
    GAAAGCCGTC TTGAATCATC GGTGGAATTC AGATGGAGGA CCTTGGATGA 
    TGACGAAGAG TGTTGTCTTT CAAGTGCATG GTATGAAGTT CTGTCAGTCA 
    TCCACATGAT GGCGATGCTT GCATTGTTTG AAGCCAACCT GATACTTATT 
    CCGAAGAACG GTCAAGTTGG AGGTGAAAGG AAGGTATCAG AAGATGCAAA 
    GAAGGATGTC GTCGATTCGT TGCTCAGAGC ATCAGGATGT TTAGATTACT 
    GCGTGCACCG TATACTTGTA CAGATGCCGG CACAAGTCAA GAAAAGTTTT 
    CCTAGTTATT TTCAGGAAGG TATGCTTGAG GCCATTTCAA TTCAAGCATT 
    GGCTCAGTGT GTAGAAATAC AACTTGGATT GGCTTCAGAG TGTGAGAAGG 
    CAACTCTGTC AGTAAAGAGG AGGCTAGCCT GTGAGCTAGT CAGTTATTTC 
    TCACAGGCTC ACTATTGCTT ATCGGGATGC GACACGAGCG ACTCGTTTGG 
    GAAGAAGCTC CTGCTGTTTC TGAAGTGGAA ATGCATGGAA GCCAAGGCAG 
    TAGCATACTA CTACCATGGC CTTGTGCTTG ACAAAGGCAA TGAAGCCAGC 
    AGCCACATCA GTGCAGTGTG CTGCCTCTCT GCAGCTGATG ATCTAGTTGC 
    AGATAGCAAG AGGGCTTGTT TGAGCTTCTG CTTGGCAAAC CCCATCACAA 
    GGGTACCTCC TCCTTGGGGT ATCATGAGGA ATATGCACAA GAAAATCCCA 
    GATTCTGCGT GCAAGAGATT CCAAATGTAT GGATATCTTT TTGAACAAGA 
    CAATAACAGT GCACTTCAAT CCTTACCAGA TCTACCAGAA TTTGCGCTGT 
    CGCTGAGACC CGAAGGGTAT GAACTGCCTA GCACTGATTC AATCTGGGAT 
    AATGTTGATA GCCAGCCTCA GATTCAGAGC CTCAAGGAGC ATCTGGATGA 
    TGAAGACGAA GTGGAAACAA AATGATACTT CAGACATCCA AAACGCTTCA 
    TTTCATTGTG CCATGAAAAG TAGCATTAGT ACTAGCAAAG ACATCGGAAT 
    GCTCAATTCA GAAGTGTTTG GATTCAGCAT ATGGCATTGA GCCAAAAAGA 
    AATCAGAATA TGTACCTTCT GTGTAGTTGA AAGTATCTAT CACTGATTAT 
    AAACAGAATC AACAATAATA GG

    Gene models with high sequence identity

    1. AT5G14020.1 [+] show detail - Endosomal targeting BRO1-like domain-containing protein
      E-value: 3e-99; Score: 359.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G14020.1

    Model type
    Protein coding
    Short Description
    Endosomal targeting BRO1-like domain-containing protein
    Computational Description
    Endosomal targeting BRO1-like domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: vacuole; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G73390.3); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR