K10134

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10134

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10134

Determination of introduced cDNA(s)

J013072A16 - Rice Full-length cDNAs - Original: J013072A16

full reading [+] show sequence

GGTTCTGCCT CAGTGTGGCA AACACAGCTG CAAGAAACAA GGCCAACAAA 
CCTCTTGAGT TTGATCAGCT GAAAATACCA AGTAAATATG GTTCAGAAAA 
ACAAGATGAT CTGCGAGAGA AGGATAGAGT AAGAGCAATG CCAGGGCAGA 
TGGAGGAAGC CGAGTTCAAC CAATATGCAG GATATGTCAC AGTGGATGCA 
AAGGCTGGAA GGGCTCTGTT CTACTATTTT GTTGAGGCTC CTCATGATCC 
TTTGAAGAAA CCACTGGTCC TATGGCTGAA TGGAGGCCCT GGTTGTTCGT 
CTTTTGGAGC TGGAGCCATG CTAGAACTTG GACCTTTCTC TGTCCGTAGT 
GACAACAAGA CATTGTACAA TAAACAGCAT GCATGGAACA CAGTGGCCAA 
TATGCTGTTC GTTGACGTCC CAGCCGGCGT TGGGTACTCA TACTCCAACA 
CTACATCAGA TTATTACAAC ATTGGTGACA AAAAGACTAC AGATGATGCA 
TACATATTCC TCATCAATTG GATGAAGAAG TTTCCTGAGT ATCAGGGCCA 
TGATTTCTTT ATAACTGGTG AGAGCTATGC GGGTCACTAT ATACCAGAGC 
TAGCTAATCT GATTGTATCT AACAATAGAG CCATCAATTC AACAAACATC 
AAGCTCAAAG GTGTTGCAAT AGGCAACGCA GATTTGCATG ACAACGTGAC 
CCTAAGAGCA TCATTTGACT ACTATTGGAG GCATGCTATG ATTTCTGACA 
GAGTCTACAG AGCCATCCAG ACTAGCTGTA GTTTCAATGA GACATACACT 
AACGACTGCC AGAATGCCAT GAACTTAGCT AACAAGGAAA AGGGAAATGT 
TGATGACTAC AACATCTATG CACCACAATG CCATGATGCT TCCAATCCCT 
CTCCTTCTGG TTCCAGTGAC TCGGTGGCAT TTGGTGATCC TTGCACAAAC 
CACTATGTCT CTTCTTATCT AAATAATCCT GAGGTCCAGA GAGCACTCCA 
TGCAAACACC ACAGGGCTGA ACTACCCATG GATGGATTGC AGTGGACTTA 
TATTTGATAA CTGGAAAGAC TCACCAGAGA CAATGCTGCC ATCAATCAAG 
ACACTAATTT CAAGTGGCAC AAGGATATGG CTGTACAGTG GTGATATGGA 
TGCAGTTTGT TCGGTCACGT CAACACAATA TGCACTAGAT ATTCTTGGGC 
TACCTGTAGA AACATCCTGG CGTCCATGGC GCATCGACAA TGAGGTTGCT 
GGCTATGTGG TTGGGTACAG AGGCCTGGTC TTTGCAACAG TCAGAGGAGC 
AGGGCACATG GTCCCTTACT ACCAGCCTCG CAGGGCGCTA GCGCTGCTCT 
CCTCATTCCT TGAAGGAAAG CTTCCCCCAG AATGATCTAG CAAGCCAAAC 
ACCTTGCAAT CGTCATGCTC AGCATCCTAC CCCACAATCC AATGGAGTCA 
TGGTATTTCA TAAGGAAGGC CCTAATATAT ATGTAGTACA CCCTCAGCAG 
CACTTCATGG ATTAAGTAGT TCTGCTCAAA ATCGAGCATT CATGTAGATA 
AAATAAATTC AGGTACTAGT ACTAAATCCT GAGAATTTTC ATACTTGGCC 
ATCTCCTGAA TGAGGCCTGA TTAAACAAGA GCAAATTGGC CTGGTTGCTC 
CACAGCAGTT GGGTGACAAA AATTCACCCA ACCAAACAGC TGCAGTCTTT 
GTTGTAAGCA GGGTGACAGA TTTTTAGGAC TATATCATCT TTCTTTAAAG 
CAATGTCATC TTCGTGGG

Gene models with high sequence identity

AT4G30610.1 [+] show detail - alpha/beta-Hydrolases superfamily protein
E-value: 3e-114; Score: 409.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Peptidase S10, serine carboxypeptidase	4.9e-137
Gene3D	no description	3.4e-135
PatternScan	Peptidase S10, serine carboxypeptidase, active site	0
PatternScan	Peptidase S10, serine carboxypeptidase, active site	0
superfamily	alpha/beta-Hydrolases	5.5e-136
FPrintScan	Peptidase S10, serine carboxypeptidase	2.8e-26
FPrintScan	Peptidase S10, serine carboxypeptidase	2.8e-26
FPrintScan	Peptidase S10, serine carboxypeptidase	2.8e-26
FPrintScan	Peptidase S10, serine carboxypeptidase	2.8e-26
HMMPanther	SERINE CARBOXYPEPTIDASE II (CARBOXYPEPTIDASE	6.9e-218
HMMPanther	Peptidase S10, serine carboxypeptidase	6.9e-218

See the detailed result >

AT4G30610.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Curator Summary: Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1. It is proteolytically processed in vivo by a separate as yet unidentified protease.
Computational Description: BRI1 SUPPRESSOR 1 (BRS1); CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 22 (TAIR:AT2G24000.1); Has 3492 Blast hits to 3440 proteins in 297 species: Archae - 0; Bacteria - 59; Metazoa - 632; Fungi - 854; Plants - 1543; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink).
Link: InterPro Scan - TAIR