K10316

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10316

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10316

Determination of introduced cDNA(s)

J013057L06 - Rice Full-length cDNAs - Original: J013057L06

full reading [+] show sequence

GACACTGCAT TGCCTTCCAC TTGGAGAGTT GAGTTCAGTT GAGAGGGAGA 
GAGAAAGAGA GAGGAGGATG CCATGGAGGT TGGTGCCATG TGGTCGGGGG 
CAGCTGTTCT TGGTGGTTCT TGGTCTTCTT CTTCTTCTTC TTGGTGAGGT 
CCATCATGGC TCAGGGGCTA GAACAGCTTC CCTCCCTAGG CTCCTCCCAG 
CTGAAGTGCG TACTCTTCGT CGTATCGCGC AGAAGATGGG GATCTTGCGT 
TGGAACTTCT CCGTTGATCC ATGCAACTCC GGCGGTAACG GTGGCTTTGG 
GGGCACTGTG AATTGTGACT GCTCCTTCTA CAACCATACA TTCTGCCATG 
TTACTAACAT AACACTGGAA GGGCAAAACT TCACTGGTGA GCTCCCACCG 
GACTTCGCCG AATTCCCCAA TCTCCTCCAA CTAGATCTAA GCAGAAGCTT 
ATTGCATGGT GGAGTGCCTG ACCAGTGGGC CCGAATGAAG CTACAGGGAC 
TGTCATTAAT GGGAAACAAT TTGTCAGGGC CTTTTCCCAT TGCTCTTACA 
AAGATCACAA CCCTGACTAA CCTGAGTATA GAAGGAAACA ATTTTTATGG 
CCCAATCCCG TCCGACATTG GACATCTCAT GCAAATGGAG AAGTTAATAT 
TATCGGCCAA TGAGTTCTCC GGACCCCTTC CTGCTGCTCT TGCTAGGTTA 
ACAAATTTAA CCGACCTAAG GATTTCTGGT AACAATTTTT CTGGAAGAGT 
GCCTGTTTTC TTGGGGAAGT TGAAAAAGCT CGGAAAATTG CAAATTGAAG 
GATCTTTATT GGAAGGGCCT ATTCCCTCAG AATTTTCCAA ATTGATAAAC 
CTTTATGATC TGAGGATTAG TGATCTGAGA GGTAGAGGAT CAGTTTTCCC 
GGACTTAAGG GAATTGGTGT CCATGAAAAC AATCATACTA CGGAATTGCT 
CCATCAATGG AAGCATACCA TCTTACATTG GGAACATGGA TAATCTTAAG 
CATCTGGATC TGTCTTTTAA TAAACTGACT GGAGAAATAC CAGCTTCATT 
TGCTAACATG GGACATGTAG ATCACATATA CCTAACAGGA AATTCACTCA 
CTGGGAGTAT ACCTGATTGG ATATTGAAGA GAAACAAGAT TGCGGACATA 
TCTTTTAACA ACTTCACGAT GGGGAGTTCA GGTCCTACCC AATGCGTTCC 
AGGGAGTGTC AATATGGTGG AGAGCTATTC ACCTGAAATG AGCAGTTTGA 
CTAATGTTGA GTCATGCTTA AAGAGGAATT TTCCATGCGG TTCTTCTAAT 
GGAAAATACA GGTATTCATT GAACATAAAT TGTGGTGACA AAGAAGTAAC 
TATTAACGGA ACAAAATATG AAACTGATGT GGAACCAAAA GGAGCTTCAT 
TGCTGTACCA AAGCCCAGGA TCAAACTGGG CATTTAGCAG CACTGGGAAC 
TTCATGGATA ATAATATCAA TGATGATAGC TACATTGCGA CAAGCGCATC 
AAAATTGACG GTGCCCAACT CGGAGTTGTA TGCAAAAGCA CGCCTTTCAC 
CTCTTTCACT GACATATTAC GGGCTCTGCA TGCATAACGG GAGTTACACC 
GTTAAGCTTC ATTTTGCTGA AATTGTTTTC ACAAATGACA GCACATACTG 
CAGCCTTGGC AAAAGAAGAT TCAATGTGTT TATACAGGGA AGAATGGTTC 
TAGAGGACTT TGACATTGAA CAGTCAGCTG GAGGAGCTGC GAAGGCAGTT 
ATCAAGACTT TCACGGCAAA CGTCACAAAT CATACACTGG AAATTCATTT 
CTATTGGGCA GGAAGGGGGA CAACAGGCAT TCCAAAAAGA GGATATTATG 
GTCCTCTGAT ATCTGCAATA TCAGTAGTAC CAAACTTTGA AGTTCCTTTG 
GCTGTTGAAC CACCGCAAAT TGGAGGTAGC AAAAAGCTTT CAAGGATATC 
TAAAGCATTC CTGGTTGCCA TGCCAATTTT AGCAATGTGC GCAGCACTTT 
TTGTCGGCAT TTATTGGATT AAATGGAGGA GAAAGAACTC AATGCATAAA 
GATCTCAGAG CCTTTGACCT CCAAACTGGA TCCTTTACCT TGAGACAAAT 
CAAAGTGGCA ACAAGGAATT TTGATGCGGC CAACAAGATC GGCGAAGGTG 
GTTTTGGTTC AGTTTACAAG GTCAGCCATC ATCACTGACT CCATGCTTAA 
ACTCGGCAGT CTGATAAGGC AATGGTCTGT TGTCTGATGG CACCATTATT 
GCTGTCAAAC AGCTATCATC AAGGTCTAAA CAAGGGAATC GAGAATTTGT 
GAATGAGATA GGCATGATAT CTGCACTCCA GCACCCAAAC CTTGTCAAGC 
TTTATGGCTG TTGTACAGAA GGAAACCAGC TCTTGCTTGT TTATGAATAC 
ATGGAAAACA ACTGCCTAGC GCGTGCTCTT TTCGTCGAAC AATACAGGCT 
GAGCTTGGAT TGGCCGACGA GACGTAAGAT TTGCCTGGGA ATAGCAAGGG 
GTTTAGCATA TCTACATGAG GAGTCTGCAA TAAGGATTGT GCACAGAGAT 
ATCAAGGCTA GCAATATACT GCTTGACAAA GACTTGAGTG CCAAGATCTC 
CGATTTTGGG CTAGCAAAGC TTAACGATGA TGATCACACA CACATAAGTA 
CAAGAATAGC TGGGACTATC GGATACATGG CTCCTGAGTA TGCAATGCGT 
GGTTATTTGA CAGACAAAGC TGATGTTTAC AGTTTTGGGG TTGTTGCTTT 
GGAAATTGTT AGTGGAAAAA GTAACACAAG CTACAGGCCA AAGGAAGATT 
TTGTTTATCT TCTCGATTGG GCTTGTGTTC TACATGAGCG AGGAAATCTC 
CTGGAGCTGG TAGATCCAGA GTTAGGCTCC GATTACTCAA CGGAAGAGGC 
GCTCCTCATG CTGAATGTTG CCCTCCTGTG CACCAATGCA GCACCAACAC 
TGAGACCAAA GATGACCAAA GTTTTGAGCC TGCTTGAGGG GCACATACCA 
CTTCAACCAT TTCTGTCAGA CCTCAGCCTT GCTGCAAACA GCCTGAGCTC 
AAGCGGTCAG CGCAGGAACT TCTGGCAAAC ACTAAGTGAT CAGAGCCAAA 
GCATGACTGC AGCACAAGCA TCATCCAGCA ACACCAATGA GTCATCATCT 
TTAGATATTG CTGGTAGCCT GAGACCTTAG GTGAGTTTAA ATGTCAGAAC 
TCAGAAGTGT TTCATGAGCT CTGTACATGT AAGAACCATT AGGAGTAGGT 
CATTTTGTCT CTTTTAGAAG TACAGTGTAA ATACCAGACT AGTGTCAGAT 
CCTACTATTA AGATGGACAC TCTGCTTAAA TCTTTAGGAT AGTGAATTTT 
ATATATGGCC AGGGCTTTCC

Gene models with high sequence identity

AT1G07650.1 [+] show detail - Leucine-rich repeat transmembrane protein kinase
E-value: 0; Score: 430.00

InterPro Scan Digest

Program	Description	E-value
PatternScan	Serine/threonine-protein kinase, active site	0
HMMPanther	PTHR23258:SF433	0
Gene3D	G3DSA:3.30.200.20	7.19999557654619e-14
superfamily	Protein kinase-like domain	1.5e-70
HMMPfam	Serine-threonine/tyrosine-protein kinase	8.1e-42
ProfileScan	Protein kinase, catalytic domain	0
HMMPanther	PTHR23258	0
Gene3D	G3DSA:1.10.510.10	2.69998997787803e-50
Gene3D	no description	5.5e-50
superfamily	L domain-like	3e-58
superfamily	Protein kinase-like domain	1.6e-06
Coil	coiled-coil	0
HMMPanther	RECEPTOR-LIKE PROTEIN KINASE-RELATED	4.5e-92
HMMPanther	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	4.5e-92
HMMPfam	Di-glucose binding within endoplasmic reticulum	4.4e-53
HMMPfam	Leucine-rich repeat	0.0011

See the detailed result >

AT1G07650.1

Model type: Protein coding
Short Description: Leucine-rich repeat transmembrane protein kinase
Computational Description: Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1); Has 190432 Blast hits to 138472 proteins in 4783 species: Archae - 131; Bacteria - 16225; Metazoa - 53388; Fungi - 11706; Plants - 85318; Viruses - 481; Other Eukaryotes - 23183 (source: NCBI BLink).
Link: InterPro Scan - TAIR