K10428

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10428

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10428

Determination of introduced cDNA(s)

  • J013003B24 - Rice Full-length cDNAs - Original: J013003B24

    full reading [+] show sequence

    Nucleotide sequence: J013003B24 - full reading 
    GCCTCGATCC CCCCTAACAG CAGCAGAATC CGCGTCCTCT CGCCGCCGCC 
    GCCGCCCGCC GCGGCGCGCG TGCGTGCATG TTCCGATCCA TGGGGACGGG 
    GACGGGGACG AAGCCGCCGG CGATGACGAC GGAGCGGTAC GAGTTCGGGC 
    CGCTCGTCGG CGAGGGCAAC TTCGCCAAGG TGTACCTCGG CCGGCACAGG 
    GCCACCGGCG AGGAGGTCGC CATCAAGGTG ATGGACAAGG AGAAGCTCGT 
    CAGGCTCGGC GCCACGGAGC TGATCAAGCG GGAGATCGCC GTCATGCAGC 
    GGCTGCGCCA CCCGAACGTC GTCCGCATCC ACGAGGTCAT GGTCAACAAG 
    CGCCGCATCT GCGTCGTCAT GGAGTACGTC CGCGGCGGCG CGCTCTACCG 
    CTACTTCCGC AGGGGCCCCA GCGGCGGCGC CGCCGGCCTC CGGGAGCACG 
    AGGCGCGCCG GTTCTTCCAG CAGCTCGTCT CCGCCGTCGC CTACTGCCAC 
    TCCCGCGGCG TGTTCCACCG CGACATCAAG CTGGACAACC TCCTCGTCGA 
    CGAGCAGGGG AACCTCAAGG TCGCCGACTT CGGCCTCTCC GCGCTCGCCG 
    ACATGGAGCG GCGAGAGGCC CACCTCCAGA CCGTCTGCGG GACGCCGCTG 
    TTCCTCGCGC CCGAGGTGTT CAAGCGCCGG GGCTACGACG GCGCCAAGGC 
    CGACGTCTGG GCATGCGGCG TCGTCCTCTA CGTGCTCCTC ACCGGCCGCA 
    AGCCTTTCCC CGACGAGCAC GTCTCCAGGC TCTACCGCCT GATCGGGCAG 
    AACCAGTTCC AGTGCCCGCC GTCGTTCAGC CCTGACCTTG CCCGTCTCGT 
    GCGCCGCCTC CTCCAGCCCG ACCCCGACCG CCGCATCACC ATACCAGAGA 
    TCATGGAGAT GAGGTGGTTC AAGAGGGGAT TCAAGGAGGT CACCTACTAC 
    ATCGACAGCA ACGACCGCCT CCGCAGCCTC GACGGCCTCG ACGGCGAGCC 
    GGAGCTGTAC GACTCCGACA CCGACACGAT CGAGTCCTCG TCGTCGTCGG 
    AATCTCCCAC CCCGGTGGCC GGAACGCCCC GCGGCATGCA CACCTCGGTG 
    TCGGCGCCGG CTCTGTCCGA GCTCGACCGC ATGGAGGACA GCGCGTCCCT 
    CCCGCTCCCG CTCCCGCTCC CGCCCCGGCC GCGCATGCCG CGGCCCAAGA 
    GCCTGAACGC GTTCGACATC ATCGCGTCGT CGCCGAGCTT CGACCTGTCG 
    GGGCTGTTCG AGGAGCGCGG CGAGAGGATG CGCTTCGTGT CCGGCGCGCC 
    GGTGGCCGAC ATTATCGCCA AGCTGCAGGA GATCGCCGGG ATGGTGAGCT 
    TCACGGCGCG GACCAAGGAC TGCCAGGTGA GCATCGAGGC GACGCGGAAC 
    GGGCAGAAGG GCGCGCTCGC CATCTCCGCC AAGGTGTTCG AGCTCACGCG 
    GGAGCTCGTC ATGGTCCAGG TGTGCAAGAA GGCCGGCGAC ACCGCCGAGT 
    ACCGCAGGTT CTGCGACAAC GAGCTCAAGG CCGGCCTGCG CGGCCTCGTC 
    GTCGACGCCC TGCCGCCTCC GGTGGAGGGC GGCGGCCATG GCGGCGCGGC 
    TGCTGCGGCT GAAGCCGAAT GAATGATGGA TCAGTTGGCT CGAAAGAATT 
    GATCTTTCAA CAAGGATTGA TCCCAGTATC TTTAATTGTT TTTCATTTTA 
    TTACTCATCA TTGATTAGTT TATTAGTCTA GTTTAGCATT TTTGACAGTG 
    ATTGTGTGGT GGATCCTGAT GAATGTATCA TGTGGCACTG TTGCTGTTTA 
    ATTAGGCTGC TAAATGCTGC TACTAATACC CTGTTCTCGT AGTTGTGCTC 
    ATTAAATTTG GGAAAGATTG TTCATTGGCA AGCC

    Gene models with high sequence identity

    1. AT4G18700.1 [+] show detail - CBL-interacting protein kinase 12
      E-value: 7e-123; Score: 438.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Serine/threonine-protein kinase-like domain 1.3e-70
    HMMPfam NAF domain 2.9e-18
    Gene3D no description 1.8e-62
    HMMSmart Serine/threonine-protein kinase domain 4.7e-103
    HMMSmart Tyrosine-protein kinase, catalytic domain 1.6e-18
    HMMPanther CBL-interacting protein kinase 3.8e-162
    HMMPanther Calcium/calmodulin-dependent protein kinase-like 3.8e-162
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    superfamily Protein kinase-like domain 5.9e-93
    ProfileScan Protein kinase, catalytic domain 52.174
    ProfileScan NAF/FISL domain 13.238

    See the detailed result >

    AT4G18700.1

    Model type
    Protein coding
    Short Description
    CBL-interacting protein kinase 12
    Curator Summary
    Encodes CBL-interacting protein kinase 12 (CIPK12).
    Computational Description
    CBL-interacting protein kinase 12 (CIPK12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 19 (TAIR:AT5G45810.1); Has 132740 Blast hits to 130588 proteins in 4556 species: Archae - 205; Bacteria - 15732; Metazoa - 48597; Fungi - 13262; Plants - 32355; Viruses - 523; Other Eukaryotes - 22066 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR