K10502

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10502

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
cauline leaf (PO:0000013)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Original: K10502

Determination of introduced cDNA(s)

  • J033052A16 - Rice Full-length cDNAs - Original: J033052A16

    full reading [+] show sequence

    Nucleotide sequence: J033052A16 - full reading 
    GAATGAGCGT CGTCGTGTGA AATTATAGCT CGACAGCCAT GAAGAAGAGC 
    AGAGAAGGTA ACCTGAAGCA TGTCAAGGGT TCGCTCTGCC TCGTCCCGCC 
    TCTACTTCTC GCGGTGTTCT TCTACCTGCA GTTCCAGACG CTGGGCCTCT 
    TCTCCCCGAT CTTCCGGTGC GGTGGCCAGT CCGCCGGCGG CGGCGGCGGC 
    GACGACTACG TCGACCGACT GCGAGCCTCG GCCACGTTCC TCCCGCTGAA 
    GGACACGCGG GAGTGGGCCG AGACGTGGTT CATCAGCACG CTCGACGACA 
    CGTCGGAGCC GGAGGGCGAG GCCAAGAACA TCGTCTTCCC GTCCGCGGCC 
    TCCGCCGGCC GCCTCCTCTG CATGTCGGCG CCGTCACGCC GTGACGGCAC 
    CAGGAACGCC TACGCGCTCG CGTGGCGCGA CGCGCTCCCG GGCGGCGCGG 
    AGCTCAGGCC GGGCCTCGCG TACGTGTCCG AGACGGCGTA CGACCACAGC 
    AACCTGTGGC ACGGCATCTC GGCGCTCATC CCGTTCGCGT CGTGGCACGC 
    GAGGAGCGGG TGCAGGGCGA GGCCCGCGAG GTGGGCGCTG TTCCACCACG 
    GCGAGGTGAG GCTCGGGATG AGCCCGTGGC TGACGTCGCT GGCCGAGGCG 
    ACCACCGGCG TGGGAATGGT TGTCGAGACG TTCAACGCGT CCGACGTCCC 
    CGTGTGCTTC GAGGAGGCGG TGGTGTTCAG GCGGAACATG GCCGGGATGA 
    CCCGGGAGCG GCTTCTCGCG GCGTTCGACT TCATGCGGTG CAAGGCCAGG 
    GCGCAGTGCG GCGTGGTGGC GGACGTCTCC GACCCCGACT CCGCCGCCGT 
    GCGCGTCACC ATCCTGTTCC GCACGGGCGC GCGGGCGTTC AAGGACGAGG 
    CCGCAGTCAC GCGCGTCTTC AAGAGCGAGT GCGCGCGCGT CGCCGGCTGC 
    GCGCTCACCA CGGCGCGCTC CGACAACCTG ACCTTCTGCG ACCAGGTGAA 
    GTTGATGAGC GGGACGGACG TGCTGATCTC GTCGCACGGG GCGCAGATGA 
    CGAATCTGGT GTTCATGGAC AGGAACAGCA GCATCATGGA GTTCTACCCC 
    AAGGGGTGGC GAGAGAGGGC GGGAGGCGGG CAGTTCGTGT ACCGGTGGGG 
    CGCGGACAGG TCGGGGATGC GGCACGAGGG CTCGTGGTGG GATCCCCACG 
    GCGAGCCGTG CCCCGGCTCG CCGGACATCC TCAGCTGCTA CAAGAACCGC 
    CAGATCGGCC ACGACGAGGC CTACTTCGCG CAGTGGGCGG CCAGGGTGTT 
    CGCGGCGGCC AAGGAGCGCA AGGCCGGCGG CTCGCCGGCG TCCACGCGGC 
    GACGAGAAGC GCCGACGTGC CAGTGCAGCT AACTGAAGTA TGATCAGTTA 
    ATGATCAAGT TGCATTGGGT CGTGATTCGT GAAGCTTTAC GTGCACGCTG 
    GTGGCATGCA GGGAGCCAGG GATGATAATT CAATGGTCTG ATTAATATTG 
    TGTTATACCT TATATATACT TGTATCTGAA TAAGCAACCT GAAAAATGCA 
    ACTGTAACTC TTGATCCGAG CATTTTTTTA GGTGG

    Gene models with high sequence identity

    1. AT4G33590.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33600.1); ...
      E-value: 3e-100; Score: 362.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G33590.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33600.1); Has 126 Blast hits to 126 proteins in 35 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 21; Plants - 62; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR