K10522

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10522

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10522

Determination of introduced cDNA(s)

  • J033069K04 - Rice Full-length cDNAs - Original: J033069K04

    full reading [+] show sequence

    Nucleotide sequence: J033069K04 - full reading 
    GGTGTTCCTC ATCCACCGCT GTAGCTGTAC CCCTCCTCCT CCTCCTCCTC 
    TCCTCGATCC GCACGCACCG CCATCTCCGA TCCGCAGCAG CAGCAGCAGC 
    AGCAGCCGCG AGGCCCCGGA GCCACGCGCA TCTCGCTCGC CGCCGGCGAG 
    AAGGCCCCGG TAACCGGTGG GCCGCAGAGG GGGAAAAGGT TTTGGAGGGA 
    GCGACGCCGC GTGCGTCCCC GTCTCGGCTG GGACCGAACC GGAGGTGTGC 
    CATTTTTGGA GGCTATCGAT GGGTCTGGAC AACAATTTCG GGGAGCTATC 
    TGGCATGTTC TGTGGCTTGT CCTATGATGG CTACACGGAT CACGGCAGCC 
    AGAGCGATTA CTTCAGGTTC GCCGACCCGC AGCCGGCGAT CGTGCCCCAG 
    ATGGACGCCG GACCCAGCTC CGCCGCTTCC TCCACGGCGT CGAGGGCCGC 
    CGTCAGCTCG GGGACCGACA ACCCAGAGGA CTGGGAGTTC ATCTCGGACG 
    AGTCGCTCAA CTATATCAGC CGCATGCTCA TGGAGGAGGA CATTGATGAG 
    AAGGTCAGCA TGTACCAGGA GGAGTCCGCG GCGCTCCGCG CTGCTGCGAA 
    GCCATTCTAT GACATTCTTG GGCACAAGTT CCCGCCCTCC CCTGACCGCC 
    AGCTGGTAGC TTGGCCCCTC GACAGCCCGA GTGAGAGTAG CACTAGCAGC 
    TATCCACACT CCTTGGCTAG TTCTGTTACT AGCAGCAACA TTAGTGGTGC 
    GGTCGATAGC AGCCAACGCC GTTATGTTGG ACACAGTGAG TATCGGAGCT 
    TGTCTGGTCA TTCTTCTCAA CCGCCGGTTG GCCCATCAAG TGATGTTCGC 
    AACGCTATGG AGACACTAGA AGATCCTTTG ATTAGTAATG GCAGGATCCC 
    TGAGTATTTG TTTGAGAGCT TTCCAACATG GGATTTCAGG AGAGGTGTTG 
    ACGAGGCACA GAAGTTTCTC CCGGGTAGCG ATAAGGTAGT GATTGATTTA 
    GAGGCTGGTG GTGTTGCAAA ACGTCAAGAA GCAGGGAAAG CTATTTCTCT 
    GAATGTCAGC AAGGCAGAGG TTTTGAAGGT AAAGAAAAAC AGACAGAGTG 
    AAGACCTTGA CGTGATGGAA GGACGGAATA GTAAACAGTC TGCATTTTGT 
    TCTGATGAAC CTGATTGGAT TGAGATGTTT GATGTTCTGC TTCGTCAAAC 
    TGAGAAGAAG GCAACTGATC TTCGAAAAAT GATGCGTTTT GAGGCTTCCA 
    AGAATTCTCA AGTTGCTCAG CCAAAAGGAC CAAGTGGGAC CCGATCACGG 
    GGACGGAAGC CAACTAAGAA GGATGTGGTG GACCTTAGGA CGCTACTCAT 
    CCACTGTGCT CAGGCAGTGG CAGCTGATGA CCGCCGGACT GCTAATGAGT 
    TGTTAAAGCA AATAAGGCAG CATGCCAAGC CAAATGGAGA TGGCTCCCAG 
    AGATTGGCGT ATTGCTTTGC AGATGGTCTT GAGGCTCGCT TGGCTGGAAC 
    AGGGAGCCAA CTTTACCATA AACTTGTGGC AAAACGGACA ACAGCCTCTG 
    ACATGCTCAA GGCATACCAT CTTTACCTTG CAGCATGCCC ATTCAAGAGG 
    CTCTCACATT TTCTTTCAAA TCAAACAATT TTGAGTTTGA CAAAAAATGC 
    ATCAAAGGTG CATATCATTG ACTTTGGCAT TTACTTCGGC TTCCAATGGC 
    CGTGCCTGAT TAGACGTCTC TTCAAGAGGG AAGGTGGGCC ACCAAAGCTG 
    CGTATCACAG GGATTGATGT ACCTCAGCCA GGTTTCCGCC CAACTGAGCG 
    CATCGAAGAG ACAGGGCAGA GGCTTGCAGA ATATGCTGAG AAGATTGGTG 
    TCCCTTTTGA GTACCAAGGC ATTGCATCAA AGTGGGAAAC AATCTGTGTT 
    GAGGATCTCA ATATTAAGAA AGATGAAGTA GTGATTGTTA ATTGCTTGTA 
    TCGGTTCAGA AATCTTATTG ATGAAACAGT TGCCATAGAC AGTCCTAGGA 
    ATAGGGTGCT CAATACCATA AGGCAAGTGA ACCCAGCAAT TTTTATCCAT 
    GGCATTGTGA ATGGGTCGTA CAGCGTTCCC TTCTTCATCA CACGGTTCCG 
    TGAGGCATTA TTTCATTTCT CTGCATTATT TGACATGCTC GAGACAACTG 
    TGCCACGGGA TGATGCCCAG CGTGCACTAA TTGAGAGAGA TCTATTTGGC 
    CGGGAAGCAC TCAATGTGAT TGCATGTGAA GGCTCAGACA GGGTCGAGAG 
    ACCGGAGACA TACAAACAGT GGCAAGTGAG GAATCTGAGA GCTGGATTTG 
    TCCAGTCTCC ATTAAACCAA GACATTGTGC TGAAAGCCAA GGACAAAGTG 
    AAAGACATCT ATCACAAAGA CTTTGTCATT GATGAAGACA GTGAATGGCT 
    CCTTCAAGGG TGGAAAGGAA GGATAATCTA TGCCATATCT ACATGGAAGC 
    CTAATAACAA TTAGGGTATG GTCTGTGAGC TGTGCCTGGT TGCCCGTTAG 
    CACTAGCAAT TAACGAAGAA AAGTACCTTG CATTGGGCTA CATGCGTATG 
    TACAGGTCTG CTTATTGTTT TCCAAAGTAC TGCTGCTCAG TTCAGTGATT 
    TTCACATTTG TCCACTATTA GTTCAGTTCA GTACTTCTGT TCTTGATTTG 
    GCCTTTGAGT TGATAATTTT TTTCAAGTTT AGAACAAGTA GGACATATGT 
    CACAATGGGT TAATTAATAA GCATAACTAT CAGCATCAAA GTGGCATATG 
    TCAGAAGACA AGTGTACTTT TTACATGCTA TGCATTCCAT GCGTTGGTGC 
    AGACCGCAGA GCAGTTTCTG CCTTGCTTTT ACCATATCTG TATCTATACT 
    TATATATAAC ATGAAAAGCA CTAGTTTCAA ACTTTTACCA TACATGAAAG 
    GTTGCTACAA GTAATCCTAG CAATTGGTTG GTTTGATCAT TTTGTATTGA 
    AGATGGATCC TTCATCCTTT CCCCCAACCC AAATCTCTCC AAAACAATTA 
    ATTTGTACTT AATATATACT CTTTGCTCTG TCCAGATCTT CATGTGCACA 
    GACAGTCCTA AACGTCCGAT CTGATGAATC TAATGGATGA TATCCATTCC 
    ATGGTCCTGC CTTCCACAGA TAACTTAATA ACAATAGTCG TCTACACTAA 
    TACCTGATAA ATTAATTACC TTAATGGCCT ATATTCCTCC TAATCCTGCT 
    CTGGACCAAA AAAAATCCCA GCCTCCTGAG AATACTCTGC AGCTGCATGG 
    GTGCCAAAGT CCAATGCCTG TAACATCATA GGCATGAATT AATTTGACTT 
    GGATACAATG GACATATATC AGCACATCTA TGCATTACGA CCTTCTGATC 
    CTCATGAAGC CTTGGTTTTA ACCGTTGCCG TACGAGTGCT TAGTGCTTGC 
    CCCTGTTTAG CCTTTTTATA TTTTCCCTTT TCCAGGGATG TAATTTACAG 
    GTTCCTTTTA TTTGGATTGC ATTGTACTAA TTACATAAAT GTTTTAACGT 
    TTTTTGGCCC AACC

    Gene models with high sequence identity

    1. AT2G37650.1 [+] show detail - GRAS family transcription factor
      E-value: 8e-163; Score: 572.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Transcription factor GRAS 3.8e-116
    ProfileScan Transcription factor GRAS 68.704

    See the detailed result >

    AT2G37650.1

    Model type
    Protein coding
    Short Description
    GRAS family transcription factor
    Computational Description
    GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 14 (TAIR:AT1G07530.1); Has 2417 Blast hits to 2350 proteins in 288 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 2410; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR