K10526

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased size (PATO:0000587) (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10526

Determination of introduced cDNA(s)

J013070H05 - Rice Full-length cDNAs - Original: J013070H05

full reading [+] show sequence

GATAGTCATT TGCCCGCTGC TTTACAATCA ACTGAGTCAA GCCAGCCCAC 
AGAATATGCT GCCCCCACAC AAGATGATGG CAATGGTCTG CAATGTGAAG 
GTACTACTGT TGATGTGTCT GGTTCTAAGG AAGATATTAT GGAAGTTGAG 
GAGAAGCTGA TTGATGATAT TTCCGGAAGC CCTTCTAGTC ATTTGCCTGT 
TGCTTTAAAA TCAACTGAGT CAAATCAGCC TGCAGAACAT GCTGTCCCCG 
CAGAAGATGA TGGCGATGGT CTGCAAAGCG AAGGTACCGC TGTTGATGTG 
GTTGATTCCA AGAAAGATGA TATGGAAGTT GAAGAAAAGC AGATTGATAT 
CTCTAGAGGC TCATCTAGCT TTCTGCCTGG CGCTTTAGAA TCAGCTGAAT 
TAAATCAACC TGCAGAACAT ACTGCCCCCA CAGAAGATCA TGGCAATTGT 
CTCCAAAGTG AAGGTACTGC TGTTGATGTG CCTTGTTCCA AGGAAGATAA 
TATGGAAGTT GAAGACCAGT TTGACGGTAT TTCTAGAGGC CCATCTAGCT 
TTTCTCCTGA CACTCTAGAA TCAGCTGAGT TAAATCAAGC TGCAGAACAT 
GCTGCCCCCA CAGAAGATGA TGGCAATGGT CCGCAAAGTG AAGGCACTTC 
TGTTGATGTG GCTGGTTCTA AGGAGGACAA TATAGAAGTC GAAGAGAAGA 
TTGATGATAT CTCTAGAGGC TCGTCTAGTC ATTTGCCTGA TGTTTTACAG 
TCGACTCCAA ATCAGCGTGC AGAGCAAGAG TGTTTAGATA ATAGTGATGA 
CGTGAACACA TCTGTTGTTT CCTCCCATGC CCCATTAAGT GGCCCCAAAT 
TTACATGTGT GAAAGAACTT GAAAAGGCAG ATGAAACCTT GGAAACGAGT 
GATGCCCAAG TAGCAGATGA AGTCTGTTTA CAGACAAATG ATGGTGCTCA 
CAATATGGCT TCAGGAAGTT GTTCCACTTT AGAAGACAAA AACGAGGACA 
GTTCTGCCCA AATAGCTGAT TGTGAAGATT TATTGCTAAG GAAAGGAACT 
ACTGTTGATG ACCTTGATGG CTGTGTCGAA GGTCACAGTG GCTTGTCCAC 
CCATTCCAAT GATGAAGTGC GCAACCTGGT AGAAATTGTC AAGGGTATGA 
ATGATACTAC TGCTGGCAGT GAAGTGCATG TGGATCCTGA AAGTCATGTA 
TCTGATGAAG TGTCAATGCC AGTTGCACCA TCAGAGCTCA AGGTAGAATT 
GAAGAACCAA TCAGAACCTG CCTGTCAGTT TGGGGCAGTG ATCGTCGAGG 
AATCAAATGT CAGCTTGGGC ATTCAGACTC CTGCATTAGC TGAATCAGAA 
GAAATGACAT CAGGAGGTTT CATGCACGGT AAAGAAGTTT GTGCTTCAGA 
ACAAACGAAT ATAGGTGCGG CTGCAGAACC TGCATCTACA AAAGATGATC 
ATGATATGCA TGAAGTTGAT AAAGAGATTG TTCATTGTAC AATATCTTCC 
CCCATAGGGG ATCAGGAAAA TCTGCAAGGT AACATTGATG GCAAGATGGA 
CGTTGGCCTG GCGGCTTGCC AGACAGAGTC AGATTTTGTG AGTGGAAATG 
ACCATTCTAG GGAGACTGAT TTAGCAGGCA GCCAGGCACC TTATGATGCC 
TCGGATAAGG AAGATACTGC TGCTGATTTG ATTGGTCCTA AGCAAGCCAC 
TCTCGAGATC GAAAAAATGC AGATTGATGG TATTCCTGAA GGTCCTTCTA 
GCGTGCCTGC TGTTTTGCAG TTAACTGACT CAAATCAGCC AGCAGAACAA 
GAGAGATTAG AGAATAGTGA CTCTAAATTT GCATCAACAA AGGACCAGGG 
CAGAGTGGAT GGAACTTCCA ATTTGAGTGG AGGTGATAAT GCAAAGTGTA 
GTCTTACCAA TGATGATTCT CAAACTGTGA ATCTAGTAGG ATATTCACCA 
TCAGAAGACT CGAATGATGA TGATTCTGTC CAAGCAGCTG ATAGTGATGG 
CGTTCTGGGA AATAAAGAAG GTACTGATGA TGTTATCTCT GCTGCATGTA 
CCGATGATGT ATCCATGCTG AAGACTGAAT CAATAGATCG TCATGGTTCT 
GACGAAGTTG ATCATTCCAC TGCCCCGTCT GCTGCCATCA AACAAGAGAG 
TGGTACTGAA GTTACGTGTG ACGCTTCTGT TCCTGTTTCT GAAAGCTCTA 
TATCAAAGGA AATCGGTACA TCGCCTGAGT GTGATGATGA TCAAGTGGCT 
ACAGCAGCAC CTCATCCACC AACGCCATTA TCTGATGCTA CTGATGTATC 
TGCTGATGTG CAAATCCCAG CAGGAATATC GGAGGCAAAG CTAGAGCAGC 
CGAACGAAAC GACTAGCCCG TCGGGTGCTG CTACTGAAGA AAATAATACT 
GTCGTGAGCA CTCAGATTCC AACATTAGCT GAATCAGAAG ATAGAACACC 
CGCCGATACT GCTATTCAAG GTACTGAGGT TGACAGCGCT GAGCCAGCAT 
CTGTAAGTGA TGACGAAAAC AAGGTTACAG CAGCTGATGA TAGTGCACTC 
CCGTCTACTG GGCCAGAGGA TACAGCGGAC GATAAAATTG ATAGCAGCGC 
TGATGCTAGT GAGAAGTAGG TTATGACAGA CTGAGTATGT AAGTGATCTC 
TCTCAAACCT AGTTGTAAAT GTTACTGCTG AACTGATACA GCCCAACTAC 
TATAGTGCCT TAGTTATAAT TATTATTGCA TCTTTTGCTA ATATTATGTT 
AATTCC

Gene models with high sequence identity

AT3G28770.1 [+] show detail - Protein of unknown function (DUF1216)
E-value: 0.0000001; Score: 55.80

InterPro Scan Digest

See the detailed result >

AT3G28770.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF1216)
Computational Description: Protein of unknown function (DUF1216); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, epidermis; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1216 (InterPro:IPR009605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1216) (TAIR:AT3G28810.1); Has 852843 Blast hits to 124903 proteins in 3296 species: Archae - 3984; Bacteria - 158225; Metazoa - 281358; Fungi - 79908; Plants - 38733; Viruses - 3887; Other Eukaryotes - 286748 (source: NCBI BLink).
Link: InterPro Scan - TAIR