K10601

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10601

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10601

Determination of introduced cDNA(s)

  • J023136C13 - Rice Full-length cDNAs - Original: J023136C13

    full reading [+] show sequence

    Nucleotide sequence: J023136C13 - full reading 
    GACCTCCTCC ACCTCCAACC CCCGATCCCC CGCAAACCCT AGCCCTCTCC 
    CCCACCCTCC TCGCCGGCGG CGAGCGGCGG CGGCGCGCGG CGGGACCCGG 
    AGCCCCCAGT AGCGCCTCCT CCGTCCTCCC CTCCCTGAGG TGCGGGGGAG 
    AGGATGCCGT CGTCGCACGG GGATCTGGAC CGGCAGATCG CGCAGCTGCG 
    GGAGTGCAAG CACCTGGCGG AGGGGGAGGT GAGGGCGCTG TGCGAGCAGG 
    CGAAGGCCAT CCTCATGGAG GAGTGGAACG TGCAGCCGGT GCGGTGCCCC 
    GTCACGGTCT GCGGCGACAT CCACGGCCAG TTCTACGACC TCATCGAGCT 
    CTTCCGCATC GGCGGCGAGG CGCCCGACAC CAACTACCTC TTCATGGGCG 
    ACTACGTCGA CCGTGGCTAC TACTCAGTGG AGACTGTTTC GTTGTTGGTG 
    GCTTTGAAAG TACGCTACAG AGATCGAATT ACAATATTGA GAGGAAATCA 
    TGAGAGCAGA CAAATCACTC AAGTGTACGG CTTCTACGAT GAATGCTTGA 
    GAAAGTATGG AAATGCAAAT GTATGGAAAT ACTTTACAGA CTTGTTTGAT 
    TATTTGCCTC TCACAGCTCT TATAGAAAAC CAGGTGTTCT GCCTTCACGG 
    TGGTCTCTCT CCATCATTGG ATACTTTAGA TAACATCCGT GCTCTTGATC 
    GTATACAAGA GGTTCCTCAT GAAGGACCCA TGTGTGATCT TTTGTGGTCT 
    GACCCAGATG ACAGATGCGG GTGGGGAATT TCACCGAGAG GAGCAGGTTA 
    TACATTTGGG CAAGATATCG CTCAACAGTT TAACCATACA AATGGTCTAT 
    CTCTCATCTC AAGGGCACAT CAACTTGTAA TGGAAGGATT TAATTGGTGT 
    CAGGACAAGA ATGTTGTGAC GGTCTTCAGT GCACCAAACT ACTGTTATCG 
    CTGTGGTAAC ATGGCTGCAA TTCTTGAGAT TGGCGAAAAC ATGGATCAGA 
    ACTTCCTCCA ATTTGATCCA GCTCCTCGGC AAATTGAACC AGACACAACA 
    CGCAAGACTC CCGACTACTT TTTGTAATTT GTGGTGTTGA CAATTTTAAC 
    TCACCTGTGT TGATGCTCCT CTCCTCCGCG GTGTCGGGGT CTGTAGATCT 
    TCTGTCCTTA GATACGGGTT CCACGAGCCC GGCTGTATGT CTCTCAATTC 
    TTTTGTTTGG AGATTTTGTT GCTGCTTCTC AACCTTTATA CAAGACGTTA 
    AAAGTTACAT GCACTGGATT TTTTTCTCCT TATGTACTTC CATTTTGTAT 
    TATTGGTAGA CAGTGAAGGG AAGCTGCATT AGGATCGCCC CTATTAATAT 
    TTTTTTCGGT CTTCACAGGG ATGCAATGCC TGATGTGCTC ACAGCATGAC 
    CGAATAAATT ATCTCCAGAT GGGAAGATAG TTCTCGTCTT CGGGCTTTCA 
    GCAATGATCC CCCATCAGAT TTGCTTTGTT TGTAATTTGG GTCAGCGTGT 
    TGTAATGAGT TGTATGTTTC ATGTTCATAG CTGGCAAGGA TCCTTTTAGC 
    TGGGTGCCCT ACT

    Gene models with high sequence identity

    1. AT1G10430.1 [+] show detail - protein phosphatase 2A-2
      E-value: 2e-173; Score: 606.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Metallophosphoesterase 1.5e-41
    HMMSmart Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 6.4e-153
    PatternScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 0
    HMMPanther SERINE/THREONINE PROTEIN PHOSPHATASE PP2A 4.8e-264
    HMMPanther Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 4.8e-264
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 9e-91
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 9e-91
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 9e-91
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 9e-91
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 9e-91
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 9e-91
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 9e-91
    superfamily Metallo-dependent phosphatases 1.4e-127
    Gene3D no description 2e-124

    See the detailed result >

    AT1G10430.1

    Model type
    Protein coding
    Short Description
    protein phosphatase 2A-2
    Curator Summary
    Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].
    Computational Description
    protein phosphatase 2A-2 (PP2A-2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-2 (TAIR:AT1G59830.1); Has 6751 Blast hits to 6569 proteins in 471 species: Archae - 80; Bacteria - 183; Metazoa - 2378; Fungi - 1410; Plants - 970; Viruses - 5; Other Eukaryotes - 1725 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR