K10640

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10640

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10640

Determination of introduced cDNA(s)

  • J033024H02 - Rice Full-length cDNAs - Original: J033024H02

    full reading [+] show sequence

    Nucleotide sequence: J033024H02 - full reading
    GGCCGGTGTT TGTTATCCAC ATTTGCGGGG CGCAGCAGCA AAAGCACAAG 
    GGCAAAGCCT CGCCGCCGTC GCCGCCGCCG CCGCCGCCGC CGCCGCGGCG
    ATCGCCACGC CATGTCTCCC TCCCTCTTGC TTACCTCTAG GGGTACCCAC
    TCGCCGGCGC CACGGCCGCA AACCCGTCGA GCATCACAAC TGCTCGTCTC
    TTTCCCCTCG CGCTGCAGCC GCTTCGTCGG CCTCCGCCTC GCGCGCGCAG
    CCGCCGATTC GCAGGGGCCC AACGGCGCTG CCCCTGGATC TGGATCTGGT
    GGGGACGGAG AGGGCAAGGC AGCCAATGGT GCCGACACCA AATTGCCAAA
    GAACCGGAGG GACATACTCC TGGAATACGT TAAAAATGTC CAGCCAGAGT
    TTATGGAGCT CTTCATAAAA AGAGCTCCGC CACAGGTTGT TGATGCCATG
    CGCCAAACGG TGACTAATAT GATTGGGACT CTGCCACCTC AATTTTTCGC
    TGTAACTGTG ACAACGGTTG CTGAAAATCT AGCTCAGCTT ATGTACAGTG
    TTCTGATGAC CGGATACATG TTCAGGAATG CGCAGTATCG TCTGGAATTG
    CAACAGAGTT TGGAGCAGAT TGCCCTTCCA GAACCAAAAG AAGAAAATGA
    TTCTGCAGAT TATGCTCCTG GAACCCAGAA AAAGGTTACT GGAGAAGTTA
    TCCGATGGAA CAAGACTACT GGTCCTGAGA AAATTGATGC AGTAAAATAT
    ATAGAATTGC TTGAAGCAGA AATTGATGAG CTCAGCCATC AAGTTGCTAG
    AAAATCATCT CAAGGAAGTA ATGAACTCTT GGAATATCTA AAAACTCTAG
    AACCTCAAAA TCTGAAGGAG CTGGCAAGTA GTGCCGGCGA GGATGTCGTT
    TTTGCTATGA ATGCATTCAT AAAGCGCCTT TTGGCTGTCT CAGATCCTGC
    ACAGATGAAG ACAACAGTTT CAGAAACAAG TGCTAATCAG CTAGCCAACT
    TGATGTTTTG GTTGATGATT GTTGGCTACA GCATGCGCAA TATTGAAGTG
    CGGTTTGACA TGGAAAGAGT ATTGGGTGCT GCCCCAAAGA TAGGGGAATT
    ACCACCTGGA GAAAACATAT AGCAGGGAGG AAAGGGGCGT AAGAGTGGGG
    AAGTGATGAT TAGTTAAAAT CTAGGGTTAC TGGCCGGCCA AGATAACTGT
    ATTTGCGTGG TCATATTATT TTGAGTGGAA TGGATTACAG CATTTGTGCA
    AAGACACCAA TCCACATTTT GGGAACTAAG ATGAGATGCT AGGCATAGCC
    ATTTCTGATA TATTTCTCGG GGAGGTATAG ACGACGAGAT ACATAGAAAC
    AATAGAACGG GACCTGATGC TGTAGTTTTG CAACCTGACT ATTGTTGGTA
    AAATACAATC AAGGCAACTC ATATTACC

    Gene models with high sequence identity

    1. AT1G63610.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 5e-114; Score: 408.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G63610.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 537 Blast hits to 411 proteins in 100 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR