K10640

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10640

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10640

Determination of introduced cDNA(s)

  • J033024H02 - Rice Full-length cDNAs - Original: J033024H02

    full reading [+] show sequence

    Nucleotide sequence: J033024H02 - full reading 
    GGCCGGTGTT TGTTATCCAC ATTTGCGGGG CGCAGCAGCA AAAGCACAAG 
    GGCAAAGCCT CGCCGCCGTC GCCGCCGCCG CCGCCGCCGC CGCCGCGGCG 
    ATCGCCACGC CATGTCTCCC TCCCTCTTGC TTACCTCTAG GGGTACCCAC 
    TCGCCGGCGC CACGGCCGCA AACCCGTCGA GCATCACAAC TGCTCGTCTC 
    TTTCCCCTCG CGCTGCAGCC GCTTCGTCGG CCTCCGCCTC GCGCGCGCAG 
    CCGCCGATTC GCAGGGGCCC AACGGCGCTG CCCCTGGATC TGGATCTGGT 
    GGGGACGGAG AGGGCAAGGC AGCCAATGGT GCCGACACCA AATTGCCAAA 
    GAACCGGAGG GACATACTCC TGGAATACGT TAAAAATGTC CAGCCAGAGT 
    TTATGGAGCT CTTCATAAAA AGAGCTCCGC CACAGGTTGT TGATGCCATG 
    CGCCAAACGG TGACTAATAT GATTGGGACT CTGCCACCTC AATTTTTCGC 
    TGTAACTGTG ACAACGGTTG CTGAAAATCT AGCTCAGCTT ATGTACAGTG 
    TTCTGATGAC CGGATACATG TTCAGGAATG CGCAGTATCG TCTGGAATTG 
    CAACAGAGTT TGGAGCAGAT TGCCCTTCCA GAACCAAAAG AAGAAAATGA 
    TTCTGCAGAT TATGCTCCTG GAACCCAGAA AAAGGTTACT GGAGAAGTTA 
    TCCGATGGAA CAAGACTACT GGTCCTGAGA AAATTGATGC AGTAAAATAT 
    ATAGAATTGC TTGAAGCAGA AATTGATGAG CTCAGCCATC AAGTTGCTAG 
    AAAATCATCT CAAGGAAGTA ATGAACTCTT GGAATATCTA AAAACTCTAG 
    AACCTCAAAA TCTGAAGGAG CTGGCAAGTA GTGCCGGCGA GGATGTCGTT 
    TTTGCTATGA ATGCATTCAT AAAGCGCCTT TTGGCTGTCT CAGATCCTGC 
    ACAGATGAAG ACAACAGTTT CAGAAACAAG TGCTAATCAG CTAGCCAACT 
    TGATGTTTTG GTTGATGATT GTTGGCTACA GCATGCGCAA TATTGAAGTG 
    CGGTTTGACA TGGAAAGAGT ATTGGGTGCT GCCCCAAAGA TAGGGGAATT 
    ACCACCTGGA GAAAACATAT AGCAGGGAGG AAAGGGGCGT AAGAGTGGGG 
    AAGTGATGAT TAGTTAAAAT CTAGGGTTAC TGGCCGGCCA AGATAACTGT 
    ATTTGCGTGG TCATATTATT TTGAGTGGAA TGGATTACAG CATTTGTGCA 
    AAGACACCAA TCCACATTTT GGGAACTAAG ATGAGATGCT AGGCATAGCC 
    ATTTCTGATA TATTTCTCGG GGAGGTATAG ACGACGAGAT ACATAGAAAC 
    AATAGAACGG GACCTGATGC TGTAGTTTTG CAACCTGACT ATTGTTGGTA 
    AAATACAATC AAGGCAACTC ATATTACC

    Gene models with high sequence identity

    1. AT1G63610.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 5e-114; Score: 408.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G63610.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 537 Blast hits to 411 proteins in 100 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR