K11014

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	low brightness (PATO:0000327) (Seed::Color::dark)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11014

Determination of introduced cDNA(s)

J033121D09 - Rice Full-length cDNAs - Original: J033121D09

full reading [+] show sequence

CAAAGAAATT TTCTCTGTCA ATAGATGATT CCATCACCAG AAATGGCCAT 
AGGAGGAGCA ATAATCTGCA GCGACTAATT CGAGGCAGCG TATAGCATCG 
TGGCACGCAG AAGCTTGGGG ATACACTCTT CTTTGCCTCC GTCCAGTCCT 
ATAAATGGTG GAGTCAGGGT GGAAGGCTAT GCATTGTGCT CATCATCTCA 
AAGCCCTTCA TCTCCTTGTC ATCTTGAGTT GCTTGAGCTT ATAGATTTCG 
ACAAGATGTC TTGCAGCTGT GGATCAAGCT GTGGCTGCGG CTCGAACTGC 
ACGTGCGGAA AGATGTACCC TGACCTGGAA GAGAAGAGCA GCAGCGCCCA 
GGCCACCGTC GTGCTCGGCG TCGCGCCGGA GAAGGCGCAC TTCGAGGCGG 
CCGCCGAGTC CGGCGAGACC GCCCACGGCT GCGGCTGCGG CTCCAGCTGC 
AAGTGCAACC CTTGCAACTG CTAAGAAGCC ATTTATTTGG CTATTATCAT 
CTGTGTGATC GTGTGTCCGT GCGTGTGATG AATGAATAAT AAAGGAGCCA 
TATCTGCTCT GGCATATGCA TAGTGCATAT GCAGTTTGTG TGATCAATCT 
GCTGTTTCTG TCCCTGTGCT GATACGCACA CGTAGCTCCT GAAACTGTCT 
GGTATATTAA TTTACTGGTG TGTTTGTGTG GGTGGGTGTG ATCGTATCTG 
TATCATATCA AACCATGCAT GTATCTATCT AGTACCTATA GCTTGCTGGT 
TC

Gene models with high sequence identity

AT5G02380.1 [+] show detail - metallothionein 2B
E-value: 1e-07; Score: 53.90

InterPro Scan Digest

See the detailed result >

AT5G02380.1

Model type: Protein coding
Short Description: metallothionein 2B
Curator Summary: cysteine-rich protein with copper-binding activity
Computational Description: metallothionein 2B (MT2B); CONTAINS InterPro DOMAIN/s: Plant metallothionein, family 15 (InterPro:IPR000347); BEST Arabidopsis thaliana protein match is: metallothionein 2A (TAIR:AT3G09390.1); Has 601 Blast hits to 601 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 0; Plants - 576; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR